Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1707 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGCCCTTCCAAGGCCTTTCTCGCGCACCGCTCCGGGGAATCTCCCGCTCCCCCTCAGCCCGACCTCCGCCGCAGCCTCCGCCGACGAAATGTGAGGTACAACATCGAGTATGACGACTACCTCGACGAGGACGACGAGGACGACGACGAGGATGAGAGGAGGAGGGAGAAGAAGCTCAAGCTAGTTGTGAAGCTGAACCAGGATAGGGATAGGGACGACGACGAGTCGGCGCCCAGCCGCACGCGCGGCGAGGCGCGTGGGAGCCACTCGCGGGATTCTTCGGAGGAGGACGAGGGCGAAAGGAAGCCCTTGAAGAAGAGAAGGATCAGCGGCGGCAGGGTTGGAAATGAAGACGGCGAGGAGGCGGAGGAGGAGGAAGAAGAGGGAAGGGAAGATAATGACGAAGAAAACGAAAACGAGGAAGATGAGAATCTCCGAGACCATAATGGTGATGATGATGGTGTGGTAAAAGGCAGAAAAGCGGATTCGAAAGGGCTCCACCCTGTTTCAGTGACTCCGAGAAAATCTTCATCTGGAATTCCGTTGCCTGATAAGAGGACATTAGAGTTGATCCTTGACAAACTTCAAAAGAAGGATACATATGGTGTGTATGCGGAGCCTGTTGATCCGGAAGAGCTTCCTGATTATCATGATGTGATTGAGCATCCAATGGACTTTGCCACAGTGCGAAAAAAGCTAGCTAATGGATCATATCCTACCTTCGAACAATTTGCGAGTGATGTATTTTTAATATGCACAAATGCAATGCAGTACAATTCACCAGAAACTATATACCACAAACAGGCACGATCAATGCAAGAATTAGCACGGAAGAAGTTTGAGAAGTTAAGGGTTGACTTAGAACACTCACAAAGTGAGCAGAAATCAGACCAAAAAGCAAGATCAAATTCCTTGGGCAAGAAGCTGACAAAGAAGCCAGTTGGTCATGCCTCACAGGAACCTGTTTGCTGTGATTTCTCGGCGGGTGCAATTCTTGCTAACATTGGAGATGTACTGCCAACTTCACACCCTATCCCAGGTGGCAGCTGTGAGAGGCCTTGCAACAATGATGGCCTTGCCGATATTAATGGTTTCATAATTGATGCAAATCAAGAAAAAGCAGATGATTTTTTATCAGGGAAGAGCCTGCTCTCTAAGTTGGGAAGAAAGCCTTTTGCTCTTGATGATAATCGTCGTGGAACTTATAATGCTTCTATTCAACCAGTTGCCAGATCGGATTCTGTTCTCATGACATTTGAGAGTGAAATTAAGCAGCTGGTTACCGTTGGTCTTCATACTGAATATTCCTATTCTCGGAGTTTAGCTCGTTTTGCTGCAACTTTAGGGCCTGTTGCTTGGAAAATTGCTTCCCGGAGAATTCAGCATGCACTTCCAAGTGGCTGCAAATTTGGTCGTGGTTGGGTTGGAGAGTATGAACCACTTCCAAGACCAGTGCTAATGCTTGATCATCGAATCCATGAAGAACCCAGCTTTGTTTCAAAGTTTCAGTCTACTGAATCTGGAAAGGGTGACAAAAATGGGAAGACTTCAGAATCTCCCGTGGATAACAATGTTCATGGACTCATGTTAGAGGGGAAACAGCCTTCGACTGGTCCTGCTAGTAGACCTGCCTCAGAAGGAAAACCATCTCTGTTTGGCTCTGCTGGAATAAGACCCAATGCTCCGGCCAATGTCCTTTATCAACAACAGAATGTTCAACCCAGTAATTCTGGCAAGCCTGAGAATAAAGGTTTGAAACATGTGGAGTTGAACTCTTTGCCCTCTAGTAATCAGAATAATGCCAATATTGGCACAAAGTTTTTAAGTAATGCTCCTCCGGGAGCGTCTAAGCCTAGAGAAATGGTGCCTAGGACCATGAATGTATCGCCTCCTGTACCTTTCAAGGAGCCAGAAACTAATGGAGTTGCAAGTGGAGATTTACCTAATGGAAAAGTCCCAAATTCTAGCTTGAATAGACGGCCAACTGGACGACCCTCTGAAAGTACATCAAATCATAGTAGAGCTGGGCCTTTCGTGCCCCATGGGCAAGATCAGAGTCTTACTGACCCAGTTCAGCTGATGAGGATGTTAGCTGAAAAGGCTCAGAAGCAACAAGCTACTTCTACTCCTTCTCCCGTTGATACTCCTCCTATGATGCCATCAGTTTCATCAGGACGAAGGGATGACTTGGGCAATGCTGCCGCGGCAGCTGCCCGTGCATGGATGTCTGTGGGAGCAGGAGGATTTAAGCAAGGAACTGATAATTCCAGTTCACCCAAAAACCAGATTTCTGCCGAATCTTTATACAACCCATCACGAGAGTTCCATCAACATATTCCGCGAACAAAGGGGGAGTTCCCTTCTGGCGGAATGCCTTTCCAGCCTGAGAAGAACTTTCCTTTTCAGGCGCTAGTACCTCAACCAATTCACCCAGGCAGCGTTTCGCAGTTTCCAAACCGACCTATGGTTTTCCCTCAATTAGCAGCTACTGATCTATCCAGATTTCAAATGCACCCTGCTTGGCAAGGTCTTAGTCCACATGGGCAACCAAGGCAAAAACCAGAAAACCTTCCTCCCGACTTGAATATTGGCTTCCAATCTCCGGGGTCACCTGCAAAACAATCTTCTGGGGTGATGGTTGACTCACAGCAACCAGACCTGGCCCTACAACTATGA 2709 0.4773 MGQIVRRKKKGRPSKAFLAHRSGESPAPPQPDLRRSLRRRNVRYNIEYDDYLDEDDEDDDEDERRREKKLKLVVKLNQDRDRDDDESAPSRTRGEARGSHSRDSSEEDEGERKPLKKRRISGGRVGNEDGEEAEEEEEEGREDNDEENENEEDENLRDHNGDDDGVVKGRKADSKGLHPVSVTPRKSSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLANGSYPTFEQFASDVFLICTNAMQYNSPETIYHKQARSMQELARKKFEKLRVDLEHSQSEQKSDQKARSNSLGKKLTKKPVGHASQEPVCCDFSAGAILANIGDVLPTSHPIPGGSCERPCNNDGLADINGFIIDANQEKADDFLSGKSLLSKLGRKPFALDDNRRGTYNASIQPVARSDSVLMTFESEIKQLVTVGLHTEYSYSRSLARFAATLGPVAWKIASRRIQHALPSGCKFGRGWVGEYEPLPRPVLMLDHRIHEEPSFVSKFQSTESGKGDKNGKTSESPVDNNVHGLMLEGKQPSTGPASRPASEGKPSLFGSAGIRPNAPANVLYQQQNVQPSNSGKPENKGLKHVELNSLPSSNQNNANIGTKFLSNAPPGASKPREMVPRTMNVSPPVPFKEPETNGVASGDLPNGKVPNSSLNRRPTGRPSESTSNHSRAGPFVPHGQDQSLTDPVQLMRMLAEKAQKQQATSTPSPVDTPPMMPSVSSGRRDDLGNAAAAAARAWMSVGAGGFKQGTDNSSSPKNQISAESLYNPSREFHQHIPRTKGEFPSGGMPFQPEKNFPFQALVPQPIHPGSVSQFPNRPMVFPQLAATDLSRFQMHPAWQGLSPHGQPRQKPENLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1707 902 MobiDBLite consensus disorder prediction 1 193 - -
Lele02g1707 902 Coils Coil 130 154 - -
Lele02g1707 902 Coils Coil 34 54 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 297 315 - -
Lele02g1707 902 SMART bromo_6 188 296 IPR001487 GO:0005515
Lele02g1707 902 MobiDBLite consensus disorder prediction 602 697 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 129 158 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 851 902 - -
Lele02g1707 902 ProSitePatterns Bromodomain signature. 213 269 IPR018359 -
Lele02g1707 902 CDD Bromodomain 195 291 - -
Lele02g1707 902 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 901 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 509 570 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 602 620 - -
Lele02g1707 902 PRINTS Bromodomain signature 258 277 IPR001487 GO:0005515
Lele02g1707 902 PRINTS Bromodomain signature 224 240 IPR001487 GO:0005515
Lele02g1707 902 PRINTS Bromodomain signature 240 258 IPR001487 GO:0005515
Lele02g1707 902 MobiDBLite consensus disorder prediction 62 128 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 159 175 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 710 739 - -
Lele02g1707 902 ProSiteProfiles Bromodomain profile. 207 277 IPR001487 GO:0005515
Lele02g1707 902 MobiDBLite consensus disorder prediction 297 324 - -
Lele02g1707 902 Pfam Bromodomain 201 281 IPR001487 GO:0005515
Lele02g1707 902 SUPERFAMILY Bromodomain 178 294 IPR036427 GO:0005515
Lele02g1707 902 MobiDBLite consensus disorder prediction 790 809 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 33 48 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 660 687 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 1 16 - -
Lele02g1707 902 MobiDBLite consensus disorder prediction 878 902 - -
Lele02g1707 902 Gene3D - 194 315 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1707 Lele-ChrLele02 20628215 20633057 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1707 02 20628215 20633057 Lele02g1707 02 20628215 20633057 ECH
Lele02g1707 02 20628215 20633057 Lele03g1422 03 8625196 8630101 hybridization
Lele02g1707 02 20628215 20633057 Lele04g1690 04 21545338 21550424 hybridization