Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1419 ATGGAGAGGAGAAGAGAGACAGAAACCAATGAGACAGAGAAGAAGGAATTACCGGTGCCTTTGGAAGAAGCCAACTTCGTAGAGCTAGTAGAGAGAAGAGGCTGCAGAAAGGAAAGGAACGATAGAGCGTTAAAGAGGAGAAAGCTTAGCGAGACTCCGAGCTTAGCTGTTTCCCCCACTCTCACATTGCCACGTGGCCATCACTATTGTCCAATTCGTGTGGGTCCCACCATCAATCAAAGGCCACACCCCAACCTGCCCCTCGAAATTAATGGAACCAAACCCCATGAGAGAGAAACAGTAAACGCTTTGGAGTTTCTAGAGAGAGAAAGACAGAGAGCAAGCTTAGGAAGGGAAGAAAGAAAGCACCAACAAAAAAAAAAAAAAAAGAGGCTGCGGACTTCCACCCCCATCAAAGAACAAAAAGCGAGTGAGCTGAGTCGCAGATCGTCTTCCATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGCCCTTCCAAGGCCTTTCTCGCTCACCGCTCCGGCGAATCTCCCGCTCCCCCTCAGCCCGACCTCCGCCGCAGCCTTCGCCGACGAAATGTGAGGTACAACATCGAGTATGACGACTACCTCGACGAGGACGACGAGGACGAGGACGAGGATGAGAGGAGGAGGGAGAAGAAGCTTAAGCTAGTGGTGAAGCTGAACCAGGATAGGGACGAAGAAGAGTCGGCGCCCAGCCGCACGCGCGGCGGGGCGCGTGGGAATCACTCGCGGGACTCTTCGGAGGAGGACGAGGGCGAGAGGAAGCCCATGAAGAAGAGAAGGATCAGCGGCGGCAGGGTTGGGAATGAAGACGGCGAGGAGGAGGAGGAAGAAGGTGGGGAAGATAATGATGAAGAAAACGAAAACGAGGAAGAAGAGAATCTCCGAGACCATAATGATGATGATGATGATGGGGTGGTAAAAGGCAGAAAAGGGGATTCGAAAGGGCTCCACCCTGTTTCAGAGACTCCGAGAAAATCTTCATCTGGAATTCCGTTGCCTGATAAGAGGACATTAGAGTTGATCCTTGACAAACTTCAAAAGAAGGATACATATGGCGTTTATGCGGAGCCTGTTGATCCGGAAGAGCTTCCTGATTATCATGATGTGATTGATCATCCAATGGACTTTGCCACAGTGCGAAAGAAGCTAGCTAGTGGATCATATCCTACCTTAGAACAATTTGAGAGTGACGTATTTTTAATATGTACCAATGCAATGCAATACAATTCATCGGAAACTATATACCACAAACAGGCACGATCAATACAAGAATTAGCACGGAAGAAATTTGAGAAGTTAAGGGTTGACTTTGAACACACACAAAGTGAGCAGAAATCAGATCAAAAAGCAAGATCAAATTCCTTGGGCAAGAAGCTGACAAAGAAGCCAGTTGGTCATGCCTCACAGGAACCTGTTGGCTCTGATTTCTCAGCGGGTGCAACTCTTGCTAACATTGGAGATGTACTGCCAACTTCCCACCCCATCTTAGGTGGCAGCTGTGAGAGGCCTTGCCACAATGATGGCCTTCCCGATGTTAATGGTTTCATAATTGATGCAAATCAAGAAAAAGCAGATGACTTTTTATCAGGGAAGAGCCTGCTCTCTAAGTTGGGAAGAAAGCCATTTGCTCTTGATGATAATCGTCGTGGAACTTATAATGCTTCTATTCAACCAGTTGCCAGATCAGATTCTGTTCTCATGACATTTGAGAGTGAAATTAAGCAGCTGGTTACCGTTGGTCTTCATGCTGACCATTCCTATTCTAGGAGTTTAGCTCGTTTCGCGGCAACTTTAGGGCCTGTTGCTTGGAGAATTGCTTCCCGGAGAATTCAGCAGGCACTTCCAAGTGGCTGCAAATTTGGTCGTGGTTGGGTAGGAGAGTATGAACCACTTCCAACACCAGTAATAATGCTTGATCATCGAATCCATAAAGAACCAAGCTTTGTTTCAAAGTTGCAGTCTACTGAATCTGGAAAGGGTGACAAAAATGGCAAGACTTCTGAATCTCCCGTGGATAACAAGGTCCATGGACTCATATCAGAGGGGAAACAGCCTTTGACTGATCCTGCTAGTAGACCTTCCTCAGAAGGAAAACCATCTCTGTTTGGCTCTGCTGGAATAAGACCCAATGCTTCAGTAAATGCTCCGGTCAATGTCCTTTATCAACAACAGAATGTTCAACCCAGGAGTTCTGGCAAGCCTGAGAAGAAGGGCTTGAAACAGGTGGAGTTGAACTCTTTGCCCTCAAGTAATCAGAATAATGTCAACCTTAGCGCAAAGTTTTTAAGTAATGCCCCTCCAGGAGTGTCTAAGCCTAGAGAAATGATGCCTAGGAACATGAATATATCACCACCTGTACCTTTCAAGGATTCAGATACTAACGGAGTTGCAAGCGGAGATTTACCTAATGGAAAAGTCCCAAATTCTAGTCTGAATAGACGGCCAACTGGATCACCCTCTGAAAGTACATCAAATCAAAGTGGTAGAGCTGGTCCTTCCCCTGGGCAAGATCAGAGTCTTACTGACCCAGTTCAGCTGATGAGGATGTTAGCTGAAAAGGCTCAGAAGCAACAGGCTTCTTCTAATCCTTCTTCCGTTGATACTCCTCCTATGACACCGTTGGTTTCATCAGGACGGAGGGATGACTTGGGCAATGCTGCTGCAGCAGCTGCCCGTGCATGGATGTCTGTGGGAGCGGGAGGATTTAAGCAAGGAACTGAGAATTCTAGTTCACCCAAAAACCAGATTTCTGCCGATTCTTTATACAACCCATCCCGAGAGTTCCATCAACATATTCCGCCAACAAGGGGGGAGTTCCCTTCCCCTTCTGGCGGAATGCCTTTCCAGCCCGAGAAGAACAATTTTCCATTTCAGGCACTAGTATCTCAACCAATTCACCCGGGCAGCGTTTTGCAGTTTCCAAACCGACCTAGGGTTTTCCCTCAATTATCAGCCACTGATCTATCCAGATTTCCGATGCAGTCTGCTTGGCAAGGTCTCAGTCCACATGGCCAACCAAGACAAAAACCAGAAACACTCCCTCCTGACTTGAATATTGGCTTCCAATCTCCAGGGTCACCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCCCAGCAACCAGACCTGGCCCTACAATTATGA 3171 0.4749 MERRRETETNETEKKELPVPLEEANFVELVERRGCRKERNDRALKRRKLSETPSLAVSPTLTLPRGHHYCPIRVGPTINQRPHPNLPLEINGTKPHERETVNALEFLERERQRASLGREERKHQQKKKKKRLRTSTPIKEQKASELSRRSSSMGQIVRRKKKGRPSKAFLAHRSGESPAPPQPDLRRSLRRRNVRYNIEYDDYLDEDDEDEDEDERRREKKLKLVVKLNQDRDEEESAPSRTRGGARGNHSRDSSEEDEGERKPMKKRRISGGRVGNEDGEEEEEEGGEDNDEENENEEEENLRDHNDDDDDGVVKGRKGDSKGLHPVSETPRKSSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRKKLASGSYPTLEQFESDVFLICTNAMQYNSSETIYHKQARSIQELARKKFEKLRVDFEHTQSEQKSDQKARSNSLGKKLTKKPVGHASQEPVGSDFSAGATLANIGDVLPTSHPILGGSCERPCHNDGLPDVNGFIIDANQEKADDFLSGKSLLSKLGRKPFALDDNRRGTYNASIQPVARSDSVLMTFESEIKQLVTVGLHADHSYSRSLARFAATLGPVAWRIASRRIQQALPSGCKFGRGWVGEYEPLPTPVIMLDHRIHKEPSFVSKLQSTESGKGDKNGKTSESPVDNKVHGLISEGKQPLTDPASRPSSEGKPSLFGSAGIRPNASVNAPVNVLYQQQNVQPRSSGKPEKKGLKQVELNSLPSSNQNNVNLSAKFLSNAPPGVSKPREMMPRNMNISPPVPFKDSDTNGVASGDLPNGKVPNSSLNRRPTGSPSESTSNQSGRAGPSPGQDQSLTDPVQLMRMLAEKAQKQQASSNPSSVDTPPMTPLVSSGRRDDLGNAAAAAARAWMSVGAGGFKQGTENSSSPKNQISADSLYNPSREFHQHIPPTRGEFPSPSGGMPFQPEKNNFPFQALVSQPIHPGSVLQFPNRPRVFPQLSATDLSRFPMQSAWQGLSPHGQPRQKPETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1419 1056 MobiDBLite consensus disorder prediction 657 718 - -
Lele01g1419 1056 Coils Coil 186 206 - -
Lele01g1419 1056 PRINTS Bromodomain signature 406 425 IPR001487 GO:0005515
Lele01g1419 1056 PRINTS Bromodomain signature 372 388 IPR001487 GO:0005515
Lele01g1419 1056 PRINTS Bromodomain signature 388 406 IPR001487 GO:0005515
Lele01g1419 1056 SUPERFAMILY Bromodomain 327 442 IPR036427 GO:0005515
Lele01g1419 1056 MobiDBLite consensus disorder prediction 1032 1056 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 755 772 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 812 852 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 214 277 - -
Lele01g1419 1056 Gene3D - 342 463 IPR036427 GO:0005515
Lele01g1419 1056 MobiDBLite consensus disorder prediction 278 307 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 75 98 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 112 342 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 446 482 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 308 328 - -
Lele01g1419 1056 ProSiteProfiles Bromodomain profile. 355 425 IPR001487 GO:0005515
Lele01g1419 1056 MobiDBLite consensus disorder prediction 1005 1056 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 755 889 - -
Lele01g1419 1056 Pfam Bromodomain 349 429 IPR001487 GO:0005515
Lele01g1419 1056 SMART bromo_6 336 444 IPR001487 GO:0005515
Lele01g1419 1056 MobiDBLite consensus disorder prediction 863 881 - -
Lele01g1419 1056 ProSitePatterns Bromodomain signature. 361 417 IPR018359 -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 185 200 - -
Lele01g1419 1056 Coils Coil 289 309 - -
Lele01g1419 1056 PANTHER BROMODOMAIN CONTAINING PROTEIN 158 1055 - -
Lele01g1419 1056 CDD Bromodomain 343 439 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 154 168 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 446 463 - -
Lele01g1419 1056 MobiDBLite consensus disorder prediction 935 962 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1419 Lele-ChrLele01 8726687 8736326 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1419 01 8726687 8736326 Lele01g1419 01 8726687 8736326 ECH
Lele01g1419 01 8726687 8736326 Lele03g1422 03 8625196 8630101 hybridization
Lele01g1419 01 8726687 8736326 Lele04g1690 04 21545338 21550424 hybridization