Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1597 ATGGGTGAGGAGGGGCCGGTGAATGAAGTTTCCAATAAGACTGATACCAATGGTAATAGCTTGCCAGAGAAAACAGTGGATGGCATTAATGAAAAGAATGACTTGGGAGCTGATGGGAAAAAGGTCTTGGAAAATAATGGAATTAAAGACTTGAAAAGGGATGGTGTGAAGGAAATGGAGGAGGATAAGAAAGTTGATGACGTGAAGGAAGTAGAAAATGAGAAAGATGATGGTGTAAAAGAAGTAGAAAAGGATAAGAAAGATGATGGTGTGGAGGAAGTAGAAGAGGATAAGAAAGATGACAACACAAAAGAAGTAGAAGAGAGTAAGAAAGACGATGACACAAAAGAAGTAGAAGAGAGTTTGAAAGATGATGACACAAAAGAAGTAGAAGAGAGTAAGAAAGATGACGTAATAGAAATGGAAGAGGATAAGAAAGATGGTGATGTAAAAGAAGTAGAAGATAAGAGGGATGAAAATGGATCTGTGGTTGAAAAATTGGATGAAGAGGCAGAGGTTAAGGAAACTAAGGAAAGTGTAGAAGTGAAAGAAAAAGAAGCAACTGAGAACTCCAAAATTGATTCAATGGAAGAAGAGGCTCCCAACATCAAGGAGGAGACCACTAAGAAGGAGGAATCTGAAGAAGAGGAGGAGGAGGATGAGAAAGAGAGCAAGGATATCATTGATAAGCCAAAAGAATATGAGGAAAAAGATAGTAAAGTTAAGGAAGGATCTAAAAAGCATGCAAGGGAGAAGAATGATGGGAAGAAAGTGAAAGATAAAAGGAGGAAAATATCTGAGGTGGAGCCAAGGACTCCTGCTATTGATCGCCCAGTACGTGAAAGAAAATCAGTGGAGAGGTTGGTAACATCATATGAAAAAGATGCATCCAAAGAATTTCACATTGAAAAGGGTCGTGGTATGCCTTTGAAAGATATACCGAACGTGGCATTTAAATTATCTAGAAGGAAGCCTGATGAGACCTTCAGATTGCTCCATACCATTCTTTTTGGAAGGAGAGGGAAGGCACCACAGATTAAGAGTAATATATTAAGGTTTTCAGGTTTTGTGTGGCATGAAAATGAGGAAAAGCAACAAATGAAAGTAAAAGAGAAATTCGACAAGTGTAACAAAGAAAAGTTATTGGAATTCTGCGATGTGCTTGACATACAAGTTAACAAGGCAACAACCAGAAAGGAAGATATTATTACGAAGCTAATAGGATTTTTGGTAGCTCCTCATGCCTCAACAACTGTCCTACTTGCAGAAAAAGAGAAGTCTAATAAGGGCAAAAAACGATCACGTGTTGAGAAAAGAGGCTCATCGGCATCTTGGATCACAACTTCAAAGCGTTCTGCTAAGAGTCGGAAGAAAAAAGAGGATTCTTCAGCTGTGGAGGAGAGGAAGAGTACTTCTGATACAGACGATGAGTCAGAGGAAGAAGAGAAGGAAGAGAAAGAAGATGAAGAAAATGAGGAGAATGAAAATGGTGTTCCTGATAAATCTGAGGATGAGGGGCCAGAGGATTCTGCAAGTGAGGAGAAAAGTGATTCTGGAAATGAATCTGAAGATGAAGAAAAACCGAAGAAGACTACAAAAGCATCATCCATAAAAAAGGAATCTTTTGCAAAAGCTAAAGCCAAGAAAGTTACTTTTACTACTAAATCTCGCTCAACAACTGGGAGAACACCTAAGAAATCAGCATCCACCCAATCAAAAGTTACCGATGATAGTGATGGAAGTCCAAAGGTCTTTTCAAGGAAGAAAAAGAATGACAAGGAGGAAAAGCAGAAGCCTTCCACTCTGACTAAGTCATCTTCCAAAGAGAAAACTGAAAAAGTTCTCAAGGTAAAGGGCAAGAACAAAGAGAAGTCGATCCCCAGTGATGAACAGTTGCGAGATGCAACAATGGAAATCCTTAAAGAAGTTGACTTCAATACGGCAACATTTACTGACATTCTGAAGCAACTGGCAAAGCGGTTTACTGTGGATCTCACCCCAAAGAAGGCAGATATAAAGCTCATGATTCAGGAAGAGCTCACAAAACTGGCTGATGCGGCAGATGATGAAGACGGAGAGGAAGATGCTGAGAAAGATGAAACCCAGCCTGCTGCACCGGAGGTTAAAGCATGA 2133 0.3971 MGEEGPVNEVSNKTDTNGNSLPEKTVDGINEKNDLGADGKKVLENNGIKDLKRDGVKEMEEDKKVDDVKEVENEKDDGVKEVEKDKKDDGVEEVEEDKKDDNTKEVEESKKDDDTKEVEESLKDDDTKEVEESKKDDVIEMEEDKKDGDVKEVEDKRDENGSVVEKLDEEAEVKETKESVEVKEKEATENSKIDSMEEEAPNIKEETTKKEESEEEEEEDEKESKDIIDKPKEYEEKDSKVKEGSKKHAREKNDGKKVKDKRRKISEVEPRTPAIDRPVRERKSVERLVTSYEKDASKEFHIEKGRGMPLKDIPNVAFKLSRRKPDETFRLLHTILFGRRGKAPQIKSNILRFSGFVWHENEEKQQMKVKEKFDKCNKEKLLEFCDVLDIQVNKATTRKEDIITKLIGFLVAPHASTTVLLAEKEKSNKGKKRSRVEKRGSSASWITTSKRSAKSRKKKEDSSAVEERKSTSDTDDESEEEEKEEKEDEENEENENGVPDKSEDEGPEDSASEEKSDSGNESEDEEKPKKTTKASSIKKESFAKAKAKKVTFTTKSRSTTGRTPKKSASTQSKVTDDSDGSPKVFSRKKKNDKEEKQKPSTLTKSSSKEKTEKVLKVKGKNKEKSIPSDEQLRDATMEILKEVDFNTATFTDILKQLAKRFTVDLTPKKADIKLMIQEELTKLADAADDEDGEEDAEKDETQPAAPEVKA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1597 710 MobiDBLite consensus disorder prediction 27 210 - -
Lele04g1597 710 PANTHER DEK PROTEIN 135 697 IPR044198 GO:0003677|GO:0006325
Lele04g1597 710 MobiDBLite consensus disorder prediction 684 698 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 512 546 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 552 579 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 684 710 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 9 26 - -
Lele04g1597 710 Coils Coil 475 496 - -
Lele04g1597 710 Coils Coil 166 186 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 454 472 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 224 282 - -
Lele04g1597 710 Pfam DEK C terminal domain 627 680 IPR014876 -
Lele04g1597 710 Coils Coil 68 88 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 423 631 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 473 499 - -
Lele04g1597 710 SUPERFAMILY DEK C-terminal domain 621 680 - -
Lele04g1597 710 FunFam DEK domain-containing chromatin associated protein 618 682 - -
Lele04g1597 710 Coils Coil 203 230 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 580 631 - -
Lele04g1597 710 Gene3D - 619 682 - -
Lele04g1597 710 MobiDBLite consensus disorder prediction 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1597 Lele-ChrLele04 20882363 20888174 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1597 04 20882363 20888174 Lele04g1597 04 20882363 20888174 ECH
Lele01g1337 01 8181033 8187162 Lele04g1597 04 20882363 20888174 hybridization
Lele02g1607 02 20000222 20005915 Lele04g1597 04 20882363 20888174 hybridization