Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1337 ATGAGTGAGGAGGGGACGGTGAGTGAAGTTTCCAATAAGACTGATTCCAATGGTAATAGCTTGCCAGAGAAAACAGTAGATGGCATTAATGAAAAGAATGACTTGGGAGCTGATGGTAAAGACGTCTTGGAAAATAATGGAATTAAAGACTTGAAAAGGGATGGTGTGAAGGAAATGGAGGAGGATAAGAAAGTTGATGATGTGAAGGAAGTAGAAGATGAGAAAGATGATGGGGTAAAAGAAGTAGAAAAAGATAAGAAAGATGATGGTGTGGAGGAAGTAGAAGAGGATAAGAAAGATAACAACACAGAAGAAGTAGAAGAGGATAAGAAAGATGACAACACAGAAAAAGTAGAAGAGAGTAAGAAAGATGATGTAACAGAAATGGAAGAGGATAAGAAAGATGGTGATGTAAAAGAAGTAGAAGATAATAGGGATGAAAATGGATCTGTGGTTGAAAAATTGGATGGAGAGGCAGAGGTTAAGGAATCTAAGGAAAGTGGAGAAGTGAAAGAAAAAGAAGCAGCTGAGAACTCCAAAATTGATGCAATGGAAGAAGAGGCTTCTCCCAACATCAAAGAGGAGACCACTAAGAAGGAGGAACCTGAAGAAGAAGAAGAGGGGGAGGAGGAGGATGAGAAAGAGCGCAAGGATAACATTGGTAAGCCAAAAGAATATGAGGAAAAAGATAGTAAAGTTAAGGAAAGATCTAAAAAGCATGCTAGGGAGAAGAGTGATGGGAAGAAAGGGAAAGATAAAAGGAGGAAAATGTCTGAGGTGGAGCCAAGGACTCCTGCTATTGATCGCCCAGTACGTGAAAGAAAAATAGTGGAGAGGTTGGTCACATCATATGAAAAAGATGCATCCAAAGAATTTCACATTGAAAAGGGTCGTGGTACGCCTTTGAAAGATATACCTAACGTGGCATTTAAGCTATCTAGAAGGAAGCCTGATGAGACCTTCAGATTGCTCCATACAATTCTTTTTGGAAGGAGAGGGAAGGCACCTCAGATTAAGAGTAATATATTAAGGTTTTCAGGTTTCGTGTGGCCTGAAAATGAGGAAAAGCAACAAATGAAAGTAAAAGAGAAATTCGACAAGTGTAACAAAGAAAAGTTATTGGAATTCTGCGATGTGCTTGACATCCAAATTAACAAGGCAACAACCAGAAAGGAAGATATTATTACGAAGCTAATAGGATTTTTGGTGGCTCCTCATGCTACAACAGCTGTACTACTCGCAGAAAAAGAGAAGTCGAATAAGGGCAAAAAGCTATCACGGGTTGAGAAAAGAGGCTCGTCCGCATCTTGGATCACAACTTCAAAGCGTTCTGCTAAGAGTCGGAAGAAAAAAGAGGATTCATCAGCTGTAGAGGAAAGGAAGAGTACTTCTGATACAGATGAGTCAGAGGAAGAAGAGAAGGAAGAGAAAGAAGATGAAGAAAATGAGGAGAATGAAAATGGTGTTCCTGATAAATCTGAGGATGAGAGGCCAGAGAATTCTGCAAGTGAGGAGAAAAGTGATTCTGGAAATGAATCTGAAGAGGAAGAAAAACCGAAGACTTCAAAAGCATCATCCATAAAAAAAGAATCTTCTGCAAAAGCTAAAGCCAAGAAAGTTACTTTTACTAATAAATCTCGCTCAACAACTGGGAGAACCCCTAAGAATTCAGCATCTACCCAGTCAAAAGTTACTGATGATAGTGATGGAAGTCCAAAGGTCTTTTCAAGGAAGAAAAAGAATGACAAGGAGGAAAAGCTGAAGCCTTCAACTCTGACTAAGTCATCTTCCAAAGACAAAACTGAAAAAGTAATCAAGGGACAGGGCAAGAACAAAGAGAAGTCGATCCCCAATGATGAACAGTTACGAGATGCAACATGCGAAATCCTTAAAGACGTTGACTTCAATACGGCAACATTTACTGACATCCTGAAGCAACTGGCAAAGCGGTTTAATGTGGATCTCACCCCAAAGAAGGCAGATATAAAGCTCATGATTCAGGAAGAGCTCACAAAACTGGCTGATGCAGCAGACGATGAAGATGGAGAGGAAGATGCTGAGAAAGATGAAACCCAGCCTACTGCACCAGAGGTTAAAGCATGA 2103 0.4004 MSEEGTVSEVSNKTDSNGNSLPEKTVDGINEKNDLGADGKDVLENNGIKDLKRDGVKEMEEDKKVDDVKEVEDEKDDGVKEVEKDKKDDGVEEVEEDKKDNNTEEVEEDKKDDNTEKVEESKKDDVTEMEEDKKDGDVKEVEDNRDENGSVVEKLDGEAEVKESKESGEVKEKEAAENSKIDAMEEEASPNIKEETTKKEEPEEEEEGEEEDEKERKDNIGKPKEYEEKDSKVKERSKKHAREKSDGKKGKDKRRKMSEVEPRTPAIDRPVRERKIVERLVTSYEKDASKEFHIEKGRGTPLKDIPNVAFKLSRRKPDETFRLLHTILFGRRGKAPQIKSNILRFSGFVWPENEEKQQMKVKEKFDKCNKEKLLEFCDVLDIQINKATTRKEDIITKLIGFLVAPHATTAVLLAEKEKSNKGKKLSRVEKRGSSASWITTSKRSAKSRKKKEDSSAVEERKSTSDTDESEEEEKEEKEDEENEENENGVPDKSEDERPENSASEEKSDSGNESEEEEKPKTSKASSIKKESSAKAKAKKVTFTNKSRSTTGRTPKNSASTQSKVTDDSDGSPKVFSRKKKNDKEEKLKPSTLTKSSSKDKTEKVIKGQGKNKEKSIPNDEQLRDATCEILKDVDFNTATFTDILKQLAKRFNVDLTPKKADIKLMIQEELTKLADAADDEDGEEDAEKDETQPTAPEVKA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1337 700 Coils Coil 466 487 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 418 619 - -
Lele01g1337 700 Pfam DEK C terminal domain 617 670 IPR014876 -
Lele01g1337 700 MobiDBLite consensus disorder prediction 214 266 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 446 464 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 490 536 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 1 266 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 465 489 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 27 199 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 674 688 - -
Lele01g1337 700 FunFam DEK domain-containing chromatin associated protein 608 672 - -
Lele01g1337 700 PANTHER DEK PROTEIN 159 687 IPR044198 GO:0003677|GO:0006325
Lele01g1337 700 MobiDBLite consensus disorder prediction 570 619 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 674 700 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 537 569 - -
Lele01g1337 700 Gene3D - 609 672 - -
Lele01g1337 700 SUPERFAMILY DEK C-terminal domain 611 670 - -
Lele01g1337 700 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1337 Lele-ChrLele01 8181033 8187162 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1337 01 8181033 8187162 Lele01g1337 01 8181033 8187162 ECH
Lele01g1337 01 8181033 8187162 Lele03g1345 03 8123707 8129998 hybridization
Lele01g1337 01 8181033 8187162 Lele04g1597 04 20882363 20888174 hybridization