Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1607 ATGGGTGAGGAGGGGACGGTGAATGAAGTTTCCAATAAGACTGATACCAATGGTAATAGCTTGCCAGAGAAAACAGTAGATGGCATTAATGAAAAGAATGACTTGGGAGCTGATGAGAAAAAGGTCTTGGAAAATAATGGAATTAAAGACTTGAAAAGGGATGGTGTGAAGGAAATGGAGGAGGATAAGAAAGTTGATGACGTGAAGGAAGTAGAAAAAGAGAAAGATGATGGTGTAAAAGAATTAGAAAAGGATAAGAAAGATGATGGTGTGGAGGAATTAGAAGAGGATAAGAAAGATGATGGTGTAAAAGAAGTAGAAGAGAGTAAGAAAGATGACGTAATAGAAATGGAAGAGGATAGGAAAGATGGTGATGTAAAAGAAGTAGAAGATAAGCGGGATGAAAAAGGATCTGTGGTTGAAAAGTTGGATGAAGAGGCAGAGGTTAAGGAAACTAAGGAAAGTGTAGAAGTGAAAGAAAAAGAAGCAACTGAGAACTCCAAAATTGATTCAATGGAAGAAGAGCCTTCTCCCAACATCAAAGAGGAGACCACTAAGAAGGAGGAATCTGAAGAAGAGGAGGAGGAGGAGTATGAGAAAGAGAGCAAGGGTATCATTGATAAGCCAAAAGAATATGAGGGAAAAAATAGTAAAGTCAAGGAAGGATCTAAAAAGCATGCAAGGGAGAAGAGTGATGGGAAGAAAGTGAAAGATAAAAGGAGGAAAATGTCTGAGGTGGAGCCAAGGACTCCTGCTATTGATCGCCCAGTACGTGAAAGAAAATCAGTGGAGAGGTTGGTAACATCATATGAAAAAGATGCATCCAAAGAATTTCACATTGAAAAGGGTTGTGGTACGCCTTTGAAAGATATACCAAACGTGGCATTTAAATTATCCAGAAGGAAGCCTGATGAGACCTTCAGATTGCTCCATACCATTCTTTTTGGAAGGAGAGGGAAGGCACCACAGATTAAGAGTAATATATTAAGGTTTTCAGGTTTTGTGTGGCATGAAAATGAGGAAAAGCAACAAATGAAAGTAAAAGAGAAATTTGACAAGTGTAACAAAGAAAAGTTATTGGAATTCTGCGATGTGCTTGACATACAAGTTAACAAGGCAACAACCAGAAAGGAAGATATTATTACGAAGCTAATAGGATTTTTGGTGGCTCCTCATGCCTCAACAACTGCTCTACTCGCAGAAAAAGAGAAGTCTAATAAGGGCAAAAAGCGATCACGGGTTGAGAGAAGAGGCTCATCGGCATCTTGGATCACAACTTCAAAGCGTTCTGCTAAGAGTCGGAAGAAAAAAGAGGATTCTTCAGCTGTGGAGGAGAGGAAGACTACTTCTGATACAGAAGATGAGTCAGAGGAAGAAGAGAAGGAAGAGAAAGAAGATGAAGAAAATGAGGAGAATGAAAATGGTGTTCCTGATAAATCTGAGGATGAGAGGCCAGAGGATTCTGCAAGTGAGGAGAAAAGTGATTCTGGAAATGAATCTGAAGATGAAGAAAAATCGAAGACTACAAAAGCATCATCCATAAAAAAAGAATCTTCTGCAAAAGCTAAAGCCAAGAAAGTTACTTTTACTAATAAATCTCGCTCGACAACGGGGAGAACACCCAAGAAATCAGCATCTACCCAGTCAAAAGTTACTGATGATAGTGATGGAAGTCCAAAGGTCTTTTCAAGGAAGAAAAAGAATGACAAGGAGGAAAAACAGAAGCCTTCAACTCTGACTAAGTCATCTTCCAAAGAGAAAACTGAAAAACTTCTTAAGGTAAAGGGAAAGAACAAAGAGAAGTCGATCCCCAGTGATGAACAGTTGCGAGATGCAACATGCGAAATCCTTAAAGAAGTTGACTTCAATACGGCAACATTTACTGACATTCTGAAGCAACTGGCAAAGCGGTTTAATGTGGATCTCACCCCAAAGAAGGCAGATATAAAGCTCATGATTCAGGAAGAGCTCACAAAACTGGCTGATGCGGCAGATGATGAAGACGGAGAGGAAGATGCTGAGAAAGATGAAACCAAGCCGGCTGCCCCGGAGGTTAAAGCATGA 2064 0.3987 MGEEGTVNEVSNKTDTNGNSLPEKTVDGINEKNDLGADEKKVLENNGIKDLKRDGVKEMEEDKKVDDVKEVEKEKDDGVKELEKDKKDDGVEELEEDKKDDGVKEVEESKKDDVIEMEEDRKDGDVKEVEDKRDEKGSVVEKLDEEAEVKETKESVEVKEKEATENSKIDSMEEEPSPNIKEETTKKEESEEEEEEEYEKESKGIIDKPKEYEGKNSKVKEGSKKHAREKSDGKKVKDKRRKMSEVEPRTPAIDRPVRERKSVERLVTSYEKDASKEFHIEKGCGTPLKDIPNVAFKLSRRKPDETFRLLHTILFGRRGKAPQIKSNILRFSGFVWHENEEKQQMKVKEKFDKCNKEKLLEFCDVLDIQVNKATTRKEDIITKLIGFLVAPHASTTALLAEKEKSNKGKKRSRVERRGSSASWITTSKRSAKSRKKKEDSSAVEERKTTSDTEDESEEEEKEEKEDEENEENENGVPDKSEDERPEDSASEEKSDSGNESEDEEKSKTTKASSIKKESSAKAKAKKVTFTNKSRSTTGRTPKKSASTQSKVTDDSDGSPKVFSRKKKNDKEEKQKPSTLTKSSSKEKTEKLLKVKGKNKEKSIPSDEQLRDATCEILKEVDFNTATFTDILKQLAKRFNVDLTPKKADIKLMIQEELTKLADAADDEDGEEDAEKDETKPAAPEVKA 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1607 687 PANTHER DEK PROTEIN 112 674 IPR044198 GO:0003677|GO:0006325
Lele02g1607 687 MobiDBLite consensus disorder prediction 524 556 - -
Lele02g1607 687 Gene3D - 596 659 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 557 607 - -
Lele02g1607 687 Coils Coil 449 474 - -
Lele02g1607 687 FunFam DEK domain-containing chromatin associated protein 595 659 - -
Lele02g1607 687 Coils Coil 180 201 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 201 260 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 661 687 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 477 523 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 53 187 - -
Lele02g1607 687 Coils Coil 68 88 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 432 450 - -
Lele02g1607 687 Pfam DEK C terminal domain 604 657 IPR014876 -
Lele02g1607 687 Coils Coil 126 162 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 53 260 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 1 41 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 451 476 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 7 26 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 401 607 - -
Lele02g1607 687 MobiDBLite consensus disorder prediction 27 41 - -
Lele02g1607 687 SUPERFAMILY DEK C-terminal domain 598 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1607 Lele-ChrLele02 20000222 20005915 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1607 02 20000222 20005915 Lele02g1607 02 20000222 20005915 ECH
Lele02g1607 02 20000222 20005915 Lele03g1345 03 8123707 8129998 hybridization
Lele02g1607 02 20000222 20005915 Lele04g1597 04 20882363 20888174 hybridization