Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1581 ATGTCGGAAAAGGGTCGGCCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCTGCCTCAGCTGAAGGATTCACCGTGATCTTTAACAAGGCTAGGGATGAGAAAAAGACAGGTGGCAAACCTGAGTCACCTGGAAAGGCTGATCCTCAAAACAGGCCTGCTGTAGAACCTGCCAAACCTCAGAGTGACCCAAGCCTTTGCCAACTGGATCCAAGACCTGTTGTTGAAACAACCTCACTAAAAAATGGTTCTGCTGCATGCAACCTCCCGCGGAGTCATAGCAATGGTCGCCCCGGTTTTGGGGGGTGTGCAAAGAAGACAGACTATTATTATTATTTGTATCTATGTGTATTAATGTTGTGGTTTATTGTTAGAATCCCAGATTGCTTACTGTTTTGCCTCGTCTTCTGTTATGAACTATGGAGAACTCTACGTGGCACCTCGAATTGTTGGACCATCGACCGAAGTCTTGTTTTATTTTATGAACTGATTTTATCCCCTTGGTTTTGGTTGCCTGGATGA 525 0.4495 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADPQNRPAVEPAKPQSDPSLCQLDPRPVVETTSLKNGSAACNLPRSHSNGRPGFGGCAKKTDYYYYLYLCVLMLWFIVRIPDCLLFCLVFCYELWRTLRGTSNCWTIDRSLVLFYELILSPWFWLPG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1581 174 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Lele04g1581 174 MobiDBLite consensus disorder prediction 31 68 - -
Lele04g1581 174 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 52 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1581 Lele-ChrLele04 20673688 20676829 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1581 04 20673688 20676829 Lele04g1581 04 20673688 20676829 ECH
Lele01g1323 01 8081439 8083947 Lele04g1581 04 20673688 20676829 hybridization
Lele02g1592 02 19805010 19809275 Lele04g1581 04 20673688 20676829 hybridization