Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1592 ATGAATATGAATCGATATGGACAGGCTGCACAAATAGGTGAGCCCCAAGACGCCTCACCTTCCAAGAAAAGAAAAATAAAGCGTCGTCGATTATTACCGTTTGCCAGCTCATCAATTCCGTTATTTCTTAACCTTCCTTGGTATCTGTCTCCTTGCAGTGCTGCTCTTGATTTAACGGCAGATTTCCCTCATTCCGTTTCTGTATCCCGCATGACGACGTTCCTGCCCAGCCAAATTAGAAGAACAAGGATTGATGTCGTTGTATCATTTTGTCCAAAGCACTCGATTCTGACAAGAGTTTTGATCCGATTCTCCACTGAAAAGGGTCGGCCACTACCAAAATTTGGTGAATGGGATGTCAATGATCCTGCCTCAGCTGAAGGATTCACCGTGATCTTTAACAAGGCTAGGGATGAGAAAAAGACAGGTGGCAAACCTGAGTCACCTGGAAAGGCTGATTCTCAAAACAGGCCTTCTGTAGAACCTGCCAAACCTCAGAGTGGTCTCTGTTTTGACCTCACTGAATTATTGGATGGGCCTACAGCTTTTGTGAGGCCTGAAGGAGACTTGAATATGGTATCTTCAGAAGCAGCATGGAAGCATTGTTCTCTTGTTACAGCGATGCATTGTGCTTCCCAACCACTAGACCACTCACCCACAAAGTCAAAAGCCAAGAACAATGCTTAA 687 0.4498 MNMNRYGQAAQIGEPQDASPSKKRKIKRRRLLPFASSSIPLFLNLPWYLSPCSAALDLTADFPHSVSVSRMTTFLPSQIRRTRIDVVVSFCPKHSILTRVLIRFSTEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPESPGKADSQNRPSVEPAKPQSGLCFDLTELLDGPTAFVRPEGDLNMVSSEAAWKHCSLVTAMHCASQPLDHSPTKSKAKNNA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1592 228 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 100 156 IPR040387 -
Lele02g1592 228 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 107 142 IPR008700 -
Lele02g1592 228 MobiDBLite consensus disorder prediction 1 25 - -
Lele02g1592 228 MobiDBLite consensus disorder prediction 137 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1592 Lele-ChrLele02 19805010 19809275 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g1592 02 19805010 19809275 Lele02g1592 02 19805010 19809275 ECH
Lele02g1592 02 19805010 19809275 Lele03g1333 03 8042179 8044999 hybridization
Lele02g1592 02 19805010 19809275 Lele04g1581 04 20673688 20676829 hybridization