Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1129 ATGCCAAGCAAGACCAGTAACATGCCAAGAAAGCTAAGGAAGGCCATTGGTGCAGTAAAAGATCAAACTAGCATAAGTCTCTCAAAGGTAACAAATGCTGCAAATTTTGAAGTTGTCATCCTCAAAGCCACAACACATGATGAGATTCCCATTGAAGAACGTTCCATTAATGAAATTGTGAGTCTTGTGTCATCCAAGAAAGTTTATGTAGTAGCATGTGCTCAATCTATTGGCAAACGTATTGGGAAAACAAGAAATTGGGTCGTTGCTTTGAAATCTCTCATGATCGTCCTTAGAATTTTTCAAGATGGAATCAAAGATATGAAACCATCAATGTTGCTTCACAAGATTACTTATTGGCAACACTTGTTGGATAGAGCTATGGGGACAAGACCAACTGGGGAAGCAAAAAAGAATTGTTTAGTTCAAATCTCTCTATACGTCGTTGTTCAGGAGACTTTTGATCTCTATAGGGATATCTTTGATGGTCTTGCTATTATTCTAGAAAACTTCTTCAAATTACCATACAAGGCATGTCTCTCTGCATTTCATGCTTGCGTGAAATCTTGTAAACAATTTGATGAGTTGGGTGATTTTTATTCATTTTGCTTAAGCATTAGGGTTGGTAGGAGCAGGTATAATAGATATGGGACACCAGAGAGATACTATGAGACAACATCTGAACATGGATCATCTTATTGCACATCCTTAGAGGATTTAACGATTGCTACTGATGATGGAATTTTGACACCAACAAGGTTTAAGATAGATCAAGATGATGATGATGAGAAGCAATCAGAGAATAATGATGATGCCTCTAGTGATTATGAGTCTTGTTCTTATTATTCTAACCCTATCAATCAAGTAGCAAGGTCAAGTTTAGACCTCATCGATTCCAATGAGTTGCAAAATAAAGCAGATAAAGAAAAGCATGGAAATAATGTTAATAATAATAACATGCCCCAAGATTATTGGGAGTTAGTTTTGGCAGAGACAACAACTAGTATAATAGAGAAAGCACCATCGAATAATAATACCATCAATTCCTTGTTTGATCAATTTGATTCAGTGCCTCATCATCATCAATATAATCCTTTTTTGGATCTGGATGATAAAACTTTTTCTCCTTGTAATAATGCTACAAATAAGAGACAGACAAGTTTGATTGATATGTTTGATGGTGAATTAGGGTTTCAAGGTAATCAAAATCCTAGTAAACTAACAGTGATGCCACCAACTTTCACTGCTCAAAGTTCTAGTTTTGATACGGATTTGACATCAAGTTTTGGTGACTTTAATTCAGACACTTCATGTGCAATGCCAGCAATAAGAAACTTTAGTTTGCAAGATCTTCTAGAGAATAACATGGCTTTGGTACCTTCTTTTCAAGAACATAATCATGGAATGGATTCATCAACTACTTCAATCTTTCAGTCTCAAGTTCTCAAAATATTGATTCGTATCAAACAAGTAAAGCATCAACATTTACTTCTCAAGGTTCTTTTAAGTCCAATTCAGCATCATCAACTTCAGCTTCTCAAGGTTGAGTTATATCAAATAAGCATAGCACCAAGTTTTGATTCTCAAGGTTTGTTTGAGATTACTTCAACATCAAGTTTTCATGACCATAATTCATTTACTTCTCAAGGTTCTTTTAAGTCCAATTCAGCATCATCAACTTCAGCTTCTCAAGGTTGA 1698 0.3522 MPSKTSNMPRKLRKAIGAVKDQTSISLSKVTNAANFEVVILKATTHDEIPIEERSINEIVSLVSSKKVYVVACAQSIGKRIGKTRNWVVALKSLMIVLRIFQDGIKDMKPSMLLHKITYWQHLLDRAMGTRPTGEAKKNCLVQISLYVVVQETFDLYRDIFDGLAIILENFFKLPYKACLSAFHACVKSCKQFDELGDFYSFCLSIRVGRSRYNRYGTPERYYETTSEHGSSYCTSLEDLTIATDDGILTPTRFKIDQDDDDEKQSENNDDASSDYESCSYYSNPINQVARSSLDLIDSNELQNKADKEKHGNNVNNNNMPQDYWELVLAETTTSIIEKAPSNNNTINSLFDQFDSVPHHHQYNPFLDLDDKTFSPCNNATNKRQTSLIDMFDGELGFQGNQNPSKLTVMPPTFTAQSSSFDTDLTSSFGDFNSDTSCAMPAIRNFSLQDLLENNMALVPSFQEHNHGMDSSTTSIFQSQVLKILIRIKQVKHQHLLLKVLLSPIQHHQLQLLKVELYQISIAPSFDSQGLFEITSTSSFHDHNSFTSQGSFKSNSASSTSASQG 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1129 565 FunFam putative clathrin assembly protein At2g25430 102 216 - -
Lele04g1129 565 Pfam ANTH domain 107 211 IPR011417 GO:0005543
Lele04g1129 565 SMART enth_2 34 162 IPR013809 -
Lele04g1129 565 SUPERFAMILY GAT-like domain 105 212 - -
Lele04g1129 565 MobiDBLite consensus disorder prediction 253 277 - -
Lele04g1129 565 ProSiteProfiles ENTH domain profile. 28 158 IPR013809 -
Lele04g1129 565 SUPERFAMILY ENTH/VHS domain 35 108 IPR008942 -
Lele04g1129 565 Gene3D ANTH domain 97 240 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele04g1129 565 PANTHER CLATHRIN ASSEMBLY PROTEIN 105 385 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1129 Lele-ChrLele04 7188916 7191083 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1129 04 7188916 7191083 Lele04g1129 04 7188916 7191083 ECH
Lele01g0642 01 3758699 3760666 Lele04g1129 04 7188916 7191083 hybridization
Lele02g0628 02 3762120 3764084 Lele04g1129 04 7188916 7191083 hybridization