Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0642 ATGGCGCCGAGCACGATCCGGAAGGCGATTGGGGCGGTGAAGGACCAGACCAGTATTGGGATTGCGAAGGTGTCAAGCAATTTGGCGCCGGAGCTCGAGGTGGCGATCGTGAAGGCGACGAGTCATGACGATGACCCAGCAAGCGAGAAATACGTACGGGAGATCTTGAGCTTGATGTCTTTTTCTCGTGGATATGTTAATGCCTGCGTTTCCGCGGTGTCCAAGCGCCTGGGGAAGACCCGGGACTGGATTGTGGCGCTCAAAGCACTTATGCTTGTGCACAGGTTGATGAATGAGGGCCCCCCCTTGTGTCAAGAGGAGATCTTATATGCTACGAGGAGGGGAACTAGGCTTCTCAACATGTCCGATTTCAGGGATGAGGCTCACTCTAGCTCCTGGGATAATTCGGCTTTCGTCAGGACCTATGCTATGTATCTGGATCAACGGCTCGAGTTGATGCTGTTCGATAGAAAAAGTGGGAGTGTTGGGGGTGGTAGTGGAGGGGGAAGCGTGGACGACAAATTTGGGGGTAGAGATAATTTTAGGTCACCCCCACCGAGACCGTACGAGAATGAGTATGGATATGGAGATTTTCGGGGGGAAAGTGGTTATGGAAGTGGGATGCGACGGACAAGATCGTTTGGGGATATGAACGAAACGGCGGGCCGAGAAGGTAGAGAGGAGAAAAAGGTCATTACTCCGTTGAGGGATATGAAGCCTGAGCGCCTTTTTGGCAAGATGGCTCATCTGCAGAGGTTGTTGGATAGATTCTTGGCTTGTAGGCCTACGGGATTGGCTAAGAATAGTAGGATGATTTTGATTGCATTGTATCCTGTTGTCAGGGAGAGCTTTCAGCTGTATGCTGATATTTGCGAAGTTTTGGCGGTTCTACTTGACAGATTCTTTGATATGGAATACCCGGATTGTGTTAAGGCATTTGATGCCTATGCCAGTGCAGCAAAGCAGATTGATGAACTTGTTGCCTTCTACAATTGGTGCAAGGATACAGGTGTGGCAAGATCGTCAGAGTATCCTGAAGTTCAGAAGATTACTAGTAAGTTACTGGAGACACTGGAGGAATTTGTGAGGGACAGGGCAAAGAGACCAAAAAGTCCAGAGAGGAAGGAGAAACCTCAGCCTGTTGCTAAAGAAGAGGAGCCAGAACCTGATATGAATGAAATAAAGGCATTACCTCCTCCTGAGAATTACACCCCACCTCCTCCACAAGAGCCGGAGCCAGAGCCGGAGCCACCAAAGCAACAAGTTACAGAGGACTTGGTGAATCTGAGAGAGGATGCGGTCACTGCAGATGATCAAGGCAATAGATTGGCTTTAGCACTCTTCAACGGTGCACCGGTTAACAATGCAAATGGATCATGGGAAGCATTCCCTTCAAACGGACAGCCAGAAGGGACTTCTGCTTGGCAAACCCCTGCTGCTGAACCTGGCAAGGCTGATTGGGAATTGGCATTGGTTGAGAATGCTAGCAATTTATCTAGGCAGAAACAAGCTTTAGGTGGTGGGCTTGATCCGTTATTGTTGAATGGCATGTATGATCAAGGAATGGTGAGACAGCATGTCAGCACTGCCCAACTGAGCGGAGGGAGTGCAAGCAGTGTTGCATTGCCAGGACCAGGGAAGAGCACTACTCCTGTTTTAGCTCTCCCAGCCCCAGATGGAACTGTGCAGGCAGTTAATCAGGATCCATTTGCGGCATCATTAACCATTCCGCCACCATCATATGTGCAAATGGCCGATATGGAGAAGAAGCAGCATTTGCTTGTACATGAGCATCAGATCTGGCAGCAATATGCGAGGGAAGGGATGCAAGGTCAAACTAGCTTGGCCAAAATAAACGGAAATGGATATTATGCTGGGGCCCCTATGCCGGCGGCAATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCTCCTCCCTCTGGGTATTACTATACACCTTACTGA 1968 0.497 MAPSTIRKAIGAVKDQTSIGIAKVSSNLAPELEVAIVKATSHDDDPASEKYVREILSLMSFSRGYVNACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGPPLCQEEILYATRRGTRLLNMSDFRDEAHSSSWDNSAFVRTYAMYLDQRLELMLFDRKSGSVGGGSGGGSVDDKFGGRDNFRSPPPRPYENEYGYGDFRGESGYGSGMRRTRSFGDMNETAGREGREEKKVITPLRDMKPERLFGKMAHLQRLLDRFLACRPTGLAKNSRMILIALYPVVRESFQLYADICEVLAVLLDRFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQKITSKLLETLEEFVRDRAKRPKSPERKEKPQPVAKEEEPEPDMNEIKALPPPENYTPPPPQEPEPEPEPPKQQVTEDLVNLREDAVTADDQGNRLALALFNGAPVNNANGSWEAFPSNGQPEGTSAWQTPAAEPGKADWELALVENASNLSRQKQALGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGKSTTPVLALPAPDGTVQAVNQDPFAASLTIPPPSYVQMADMEKKQHLLVHEHQIWQQYAREGMQGQTSLAKINGNGYYAGAPMPAAMPYGMPPVNGMGPPPSGYYYTPY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0642 655 FunFam Clathrin coat assembly protein 3 156 - -
Lele01g0642 655 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lele01g0642 655 MobiDBLite consensus disorder prediction 399 416 - -
Lele01g0642 655 SUPERFAMILY GAT-like domain 234 364 - -
Lele01g0642 655 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lele01g0642 655 Gene3D ANTH domain 227 376 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele01g0642 655 MobiDBLite consensus disorder prediction 364 422 - -
Lele01g0642 655 FunFam putative clathrin assembly protein At2g25430 229 374 - -
Lele01g0642 655 SMART enth_2 30 160 IPR013809 -
Lele01g0642 655 CDD ANTH_N_AP180_plant 32 152 - -
Lele01g0642 655 Pfam ANTH domain 31 152 IPR011417 GO:0005543
Lele01g0642 655 Pfam ANTH domain 210 364 IPR011417 GO:0005543
Lele01g0642 655 Gene3D - 2 156 IPR008942 -
Lele01g0642 655 MobiDBLite consensus disorder prediction 161 194 - -
Lele01g0642 655 MobiDBLite consensus disorder prediction 364 392 - -
Lele01g0642 655 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 595 IPR045192 GO:0048268|GO:0072583
Lele01g0642 655 Coils Coil 419 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0642 Lele-ChrLele01 3758699 3760666 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0642 01 3758699 3760666 Lele01g0642 01 3758699 3760666 ECH
Lele01g0642 01 3758699 3760666 Lele03g0642 03 3771886 3773679 hybridization
Lele01g0642 01 3758699 3760666 Lele04g1129 04 7188916 7191083 hybridization