Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0628 ATGGCGCCGAGCACGATCCGGAAGGCGATTGGGGCGGTAAAGGACCAGACTAGTATTGGGATTGCGAAGGTGGCAAGCAATTTGGCGCCGGAGCTCGAGGTGGCGATCGTGAAGGCGACGAGCCATGACGATGACCCAGCAAGTGAGAAATACGTACGGGAGATCTTGAGCTTGATGTCTTTTTCTCGTGGCTATGTTCATGCCTGCGTTTCTGCGGTGTCGAAGCGCCTGGGAAAGACCCGGGACTGGATTGTGGCGCTCAAAGCACTTATGCTTGTGCACAGGTTGATGAATGAGGGCACCCCCTTGTTTCAAGAGGAGATCTTATATGCCACGAGGAGGGGAACTAGGCTTCTCAACATGTCCGATTTCAGGGATGAGGCTCACTCTAGCTCCTGGGATCACTCGGCTTTCGTCAGGACCTATGCTATGTATCTGGATCAACGGCTCGAGTTGATGCTGTTCGATAGAAAAAGTGGGAGTGTTGGGGGTGGTAGTGGCGGGGGTAGCGTGGACGACAAGTTTGGGGGTAGAGATAATTTTAGGTCACCCCCACCGAGACCGTATGAAAATGAGTATGGATATGGAGATTTTCGGGGGGAAAGCGGGTATGGAGGTGGGGTGCGACGGACAAGATCGTTTGGGGATATGAGCGAAACGGCGGGCCGAGAAGGTGGAGAGGAGAAAAAGGTCAATACTCCGTTGAGGGATATGAGGCCCGAGCGCCTTTTTGGCAAGATAACTCATCTGCAGAGGTTGTTGGATAGATTCTTGGCTTGTAGGCCTACGGGATTGGCAAAGAATAGTAGGATGATTTTGATTGCATTGTATCCTGTTGTCAGGGAGAGCTTTCAGCTTTATGCTGATATTTGTGAAGTTTTGGCGGTTTTACTTGACAAATTCTTTGATATGGAATACCCGGATTGTGTCAAGGCATTTGATGCCTATGCCAGTGCAGCAAAGCAGATTGATGAGCTTGTTGCCTTCTACAATTGGTGCAAGGATACAGGTGTGGCAAGATCGTCAGAGTACCCTGAAGTTCAGAAGATTACTAGTAAGTTACTGGAGACCCTGGAGGAATTTGTGAGGGACAGGGCAAAGAGACCAAAAAGTCCAGAGAGGAAGGAGGAACCTCAGCCTGTGGCTAAAGAAGAGGAGCCAGAACCTGATATGAATGAAATAAAGGCATTACCTCCGCCTGAGAATTACACCCCACCTCCTCCACCAGAGCCACAGCCAGAGCCTGAGCCACCAAAGCAACAAGTTACAGAGGACTTGGTGAATCTGAGAGATGATGCGGTCACCGCAGATGATCAAGGCAATAGATTGGCTTTAGCACTCTTCAACGGTGCACCAGCTAACAATGCAAATGGATCATGGGAAGCATTCCCATCAAACGGACAGCCAGAAGTGACTTCTGCTTGGCAAACCCCAGCTGCTGAACCTGGCAAGGCTGATTGGGAATTGGCATTGGTTGAGACTGCTAGCAATTTATCTAGGCAGAAACAAGCTTTAGGTGGCGGGCTTGATCCGTTATTGTTGAATGGCATGTATGATCAAGGAATGGTGAGACAGCATGTCAGCACTGCCCAACTGAGTGGAGGGAGTGCAAGCAGTGTTGCGTTGCCTGGACCAGGAAAGAGCACCACCCCTGTTTTAGCTCTTCCGGCCCCAGATGGATCTGTGCAGGCGGTTAATCAGGATCCATTTGCTGCATCATTAACCGTTCCACCACCATCATATGTGCAAATGGCCGATATGGAGAAGAAGCAGCATTTGCTTGTACATGAGCAGCAGATTTGGCAGCAATACTCGAGGGAAGGGATGCAAGGTCAAACTAGCTTGGCCAAAATCAACGGAACTGGATATTATGCTGGGGCTCCGATGCCGGCGATGCCTTATGGAATGCCCTCAGTCAATGGAATGGGACCTCCTCCCTCCGGGTATTACTATACACCTTACTGA 1965 0.5028 MAPSTIRKAIGAVKDQTSIGIAKVASNLAPELEVAIVKATSHDDDPASEKYVREILSLMSFSRGYVHACVSAVSKRLGKTRDWIVALKALMLVHRLMNEGTPLFQEEILYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYAMYLDQRLELMLFDRKSGSVGGGSGGGSVDDKFGGRDNFRSPPPRPYENEYGYGDFRGESGYGGGVRRTRSFGDMSETAGREGGEEKKVNTPLRDMRPERLFGKITHLQRLLDRFLACRPTGLAKNSRMILIALYPVVRESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKDTGVARSSEYPEVQKITSKLLETLEEFVRDRAKRPKSPERKEEPQPVAKEEEPEPDMNEIKALPPPENYTPPPPPEPQPEPEPPKQQVTEDLVNLRDDAVTADDQGNRLALALFNGAPANNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSRQKQALGGGLDPLLLNGMYDQGMVRQHVSTAQLSGGSASSVALPGPGKSTTPVLALPAPDGSVQAVNQDPFAASLTVPPPSYVQMADMEKKQHLLVHEQQIWQQYSREGMQGQTSLAKINGTGYYAGAPMPAMPYGMPSVNGMGPPPSGYYYTPY 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0628 654 SUPERFAMILY ENTH/VHS domain 30 151 IPR008942 -
Lele02g0628 654 MobiDBLite consensus disorder prediction 363 422 - -
Lele02g0628 654 FunFam Clathrin coat assembly protein 3 156 - -
Lele02g0628 654 ProSiteProfiles ENTH domain profile. 24 160 IPR013809 -
Lele02g0628 654 Pfam ANTH domain 31 152 IPR011417 GO:0005543
Lele02g0628 654 Pfam ANTH domain 227 364 IPR011417 GO:0005543
Lele02g0628 654 MobiDBLite consensus disorder prediction 363 392 - -
Lele02g0628 654 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 596 IPR045192 GO:0048268|GO:0072583
Lele02g0628 654 MobiDBLite consensus disorder prediction 399 418 - -
Lele02g0628 654 MobiDBLite consensus disorder prediction 161 195 - -
Lele02g0628 654 SMART enth_2 30 160 IPR013809 -
Lele02g0628 654 FunFam putative clathrin assembly protein At2g25430 229 374 - -
Lele02g0628 654 SUPERFAMILY GAT-like domain 233 364 - -
Lele02g0628 654 Gene3D ANTH domain 228 375 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele02g0628 654 CDD ANTH_N_AP180_plant 32 152 - -
Lele02g0628 654 Gene3D - 2 156 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0628 Lele-ChrLele02 3762120 3764084 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0628 02 3762120 3764084 Lele02g0628 02 3762120 3764084 ECH
Lele02g0628 02 3762120 3764084 Lele03g0642 03 3771886 3773679 hybridization
Lele02g0628 02 3762120 3764084 Lele04g1129 04 7188916 7191083 hybridization