Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0963 ATGCTCACCGATTACCATTGTACCTTGTTTGGAGAATATGAAATGGCTTATGCGAGTTATGCGGCCAAAAGCCCAAAGAGCTGGTCGTCAAAACAGACTGCACAGCTCACGCCCTCGATTACGATGTCGCTTCCAACTCTGACGTCTGGTGTTCCTCCGGCTCCGTCGCTCCCGACGGCCGTCTCATCCAGACCGGTGGCTTCAACAAGAGATCGTACTGTTAGGATGATTAGTCCTTGCCCCGACTGTGACTGGGAAGAATTAGACGGCGGACTGGCAGAGCGAAGGTGGTACGCCACCAATCACATTCTTTCAGACGGACGTCAGATTATAGGTGGTGGCAGAATAACGTTCAACTACGAGTTTTATCCTAAATCAGACGCAAAAAATAGTTACATTCTACCGTTTCTTGTACAGACCAATGATGCGGGCATAGAGAACAACTTGTACCCATTTGTTTTTCTGAACGTGGATGGCAACATGTTCATCTTCCCCAACAATCGAGCCATCTTACTGGATTTCGACAAGAACAAGGTGGTCAGGAACTACCCACAAATACCAGGGGGAGATCCCAGATCATATCCTAGTACAGGATCGGCAGTGTTATTACCTTTGAAGAATCTACAGGCCAAGACGGTCGAAGCAGAGGTAATGATTTGTGGTGGAGCCCCGAGAGGGTCGTATCAGCAGGCCAACCAAGGTAAATTTCTCCCGGCTTTGACTACCTGTGCTCGGATCAAGATCACTAACCCGAACCCACAGTGGGTCATGGAGACAATGCCTGGATCTAGAGTTATGAATGACATGGTAATGCTTCCTAACGGTAATGTCTTGATCATCATTGGAGCAGCTTCGGGGAAGGCCGGATGGGAAGCGGGTCGCAACCCGGTGTTGAACCCATTTCTATACAAAACGAGCAGCCCAGCGGGATTGGAGGCGTTTTCCCCATCGTATTTGGAGTCTGGATTCTCTAACGTGCGTCCAAAAATTGTGTCTCCTCCTTCTCAAGCTAAATTCAAGTACGATCAGAAGTTGAAGCTGAGGTTCCAGGTGACAGCAACATTAGTTCAAAATATGGTGTCAGTGACGATGTTGTTGCCTCCATTTAATACACATTCGTTCTCCATGAATCAGAGGATGTCGGTGCTGGAGCCAAGCAAAGTGACGAATCTGGGAAGATCTGTGTATGAAGTTGAGGTCACCATGCCACCTTCGGCTATTCTTGCACCTCCTGGTTACTATATGCTATTTGTGGTCCATCAAGAAATCCCAAGCAACGGCATCTGGGTGCAACTGATATGA 1302 0.4816 MLTDYHCTLFGEYEMAYASYAAKSPKSWSSKQTAQLTPSITMSLPTLTSGVPPAPSLPTAVSSRPVASTRDRTVRMISPCPDCDWEELDGGLAERRWYATNHILSDGRQIIGGGRITFNYEFYPKSDAKNSYILPFLVQTNDAGIENNLYPFVFLNVDGNMFIFPNNRAILLDFDKNKVVRNYPQIPGGDPRSYPSTGSAVLLPLKNLQAKTVEAEVMICGGAPRGSYQQANQGKFLPALTTCARIKITNPNPQWVMETMPGSRVMNDMVMLPNGNVLIIIGAASGKAGWEAGRNPVLNPFLYKTSSPAGLEAFSPSYLESGFSNVRPKIVSPPSQAKFKYDQKLKLRFQVTATLVQNMVSVTMLLPPFNTHSFSMNQRMSVLEPSKVTNLGRSVYEVEVTMPPSAILAPPGYYMLFVVHQEIPSNGIWVQLI 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0963 433 Gene3D Immunoglobulins 326 433 IPR013783 -
Lele04g0963 433 SUPERFAMILY E set domains 323 432 IPR014756 -
Lele04g0963 433 CDD E_set_GO_C 322 432 IPR015202 -
Lele04g0963 433 Pfam Glyoxal oxidase N-terminus 71 222 IPR009880 -
Lele04g0963 433 PANTHER SECRETED PROTEIN-RELATED 72 310 - -
Lele04g0963 433 Pfam Galactose oxidase-like, Early set domain 327 431 IPR015202 -
Lele04g0963 433 Gene3D - 28 323 IPR037293 -
Lele04g0963 433 SUPERFAMILY Galactose oxidase, central domain 66 304 IPR011043 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0963 Lele-ChrLele04 5952623 5954612 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0963 04 5952623 5954612 Lele04g0963 04 5952623 5954612 ECH
Lele01g0966 01 5589396 5591030 Lele04g0963 04 5952623 5954612 hybridization
Lele02g0969 02 5892073 5893492 Lele04g0963 04 5952623 5954612 hybridization