Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0966 ATGATGGCTTCTCTTCTTCTTTCTCCTTTTCTCTTTCACATTCTCCTTCTTGCCACCATACCATCTCTCGCCGACGCCGGCAACGGACAATGGCAGCTCCTACAGAACAGCATCGGCATTGTGGCCATGCACATGCAGTTACTCCACCACGACCGTGTCGTCATCTTCGACCGCACCGACTTTGGCCTCTCTAACTTATCCTTGCCCAATGGCAGATGCCGCCAAAATCCCAAAGAGCTGGTCGTCAAAACAGACTGTACAGCTCACGCCCTCGAGTACGACGTGGCTTCCAATTCCTTCCGCCCCCTATTTGTCCACACTAACGTCTGGTGTTCCTCCGGCTCCGTCGCTCCCGACGGCCGTCTCATCCAGACCGGTGGATTCAATGACGGAGATCGTACTGTCAGGATGATCAGTCCTTGCCCCGACTGTGACTGGGAAGAAGTAGCCGATGGACTGGCTGAGCGAAGGTGGTACGCCACCAATCACATTCTTTCAGACGGACGTCAGATTATAGTTGGCGGCAGAAGAACGTTCAACTACGAGTTTTATCCTAAAACAGACGCCAGAAATAGTTACAGTCTACCGTTTCTTGTGCAGACCAATGATGCAGGCATAGAGAACAACTTGTACCCCTTTGTTTTTTTGAACGTGGATGGCAACATGTTCATCTTCGCCAACAATCGAGCCATCTTACTGGACTTCGACAAGAACAAGGTGGTCAGGACCTACCCGCAAATACCAGGTGGAGATCCCAGATCATATCCTAGTACAGGTTCGGCAGTGTTATTACCTTTGAAGAATCTACAGGCCAAGACGGTGGAAGCAGAGGTTCTGATCTGTGGGGGAGCCCCGAGAGGGTCGTATGAGCAGGCAAATCAAGGCAAATTTCTCCCAGCTTTGAATACCTGTGCTCGGATCATGATAACTGACCCGAACCCACAGTGGGTCATGGAGACAATGCCCGGATCTAGAGTTATGAATGACATGTTAATGCTTCCTGATGGTAATGTTTTGATCATCAATGGAGCAGCTTCGGGCACGGCCGGATGGGAAGCGGGTCGCAACCCGGTGTTAAACCCGTTTCTATATAAAACAAACAGCCCAGTGGGGTCTCGATTCGAATTGCAAAACCCGAGTAATATTCCACGGATGTATCACTCGACGGCTGTTCTGCTTCGCGACGGACGCGTGCTTATCGCCGGAAGCAATCCTCACGTATACTACAATTTCACCAATGTCTTATTTCCAACGGAGTTCAGTCTGGAGGCGTTTTCCCCATCGTATTTAGAGTCTGGATTCTCTAATGTACGTCCCAAAATTGTGTCTCCCCCTTCTGAGGCGAAACTCAAGTATGGTGAGAAGGTGAAGCTGAGGTTCCAGGTGACAGCAACATTAGTTACAAATATGGTGTCGGTGACGATGTTGTTGCCGCCATTTAACACACACTCGTTCTCCATGAATCAGAGGATGTTGGTGCTGGAGCCCAGAAAAGTGACGAATCAGGGAAGATCTGCGTATGAAGTTGAGGTCACCACGCCACCTTCGCCTATTCTTGCACCTCCTGGTTACTATATGCTATTTGTGGTCCATCAAGAAATCCCAAGCAACGGTATCTGGGTGCAACTAATATAA 1635 0.4966 MMASLLLSPFLFHILLLATIPSLADAGNGQWQLLQNSIGIVAMHMQLLHHDRVVIFDRTDFGLSNLSLPNGRCRQNPKELVVKTDCTAHALEYDVASNSFRPLFVHTNVWCSSGSVAPDGRLIQTGGFNDGDRTVRMISPCPDCDWEEVADGLAERRWYATNHILSDGRQIIVGGRRTFNYEFYPKTDARNSYSLPFLVQTNDAGIENNLYPFVFLNVDGNMFIFANNRAILLDFDKNKVVRTYPQIPGGDPRSYPSTGSAVLLPLKNLQAKTVEAEVLICGGAPRGSYEQANQGKFLPALNTCARIMITDPNPQWVMETMPGSRVMNDMLMLPDGNVLIINGAASGTAGWEAGRNPVLNPFLYKTNSPVGSRFELQNPSNIPRMYHSTAVLLRDGRVLIAGSNPHVYYNFTNVLFPTEFSLEAFSPSYLESGFSNVRPKIVSPPSEAKLKYGEKVKLRFQVTATLVTNMVSVTMLLPPFNTHSFSMNQRMLVLEPRKVTNQGRSAYEVEVTTPPSPILAPPGYYMLFVVHQEIPSNGIWVQLI 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0966 544 Pfam Glyoxal oxidase N-terminus 43 283 IPR009880 -
Lele01g0966 544 CDD E_set_GO_C 433 543 IPR015202 -
Lele01g0966 544 Pfam Galactose oxidase-like, Early set domain 438 542 IPR015202 -
Lele01g0966 544 PANTHER SECRETED PROTEIN-RELATED 17 543 - -
Lele01g0966 544 FunFam Aldehyde oxidase GLOX 25 436 - -
Lele01g0966 544 Gene3D - 25 435 IPR037293 -
Lele01g0966 544 SUPERFAMILY Galactose oxidase, central domain 91 431 IPR011043 -
Lele01g0966 544 SUPERFAMILY E set domains 434 543 IPR014756 -
Lele01g0966 544 Gene3D Immunoglobulins 437 544 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0966 Lele-ChrLele01 5589396 5591030 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0966 01 5589396 5591030 Lele01g0966 01 5589396 5591030 ECH
Lele01g0966 01 5589396 5591030 Lele03g0963 03 5609117 5610748 hybridization
Lele01g0966 01 5589396 5591030 Lele04g0963 04 5952623 5954612 hybridization