Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0969 ATGCACAGGCAGTTGCTCCACCACGACCGTGTCATCATCTTCGACCGCACCGACTTTGGCCTCTCTAACTTATCATTGCCCAATGGCAGATGCCGCCAAAACCCCAAAGAGCTGGTCGTCAAAACAGACTGCACAGCTCACGCCCTCGAGTACGATGTCACTTCCAACTCTTTCCGCCCTCTCTTTGTCCACACTGACGTCTGGTGTTCCACCGGCTCCGTCGCTCCCGACGGCCGTCTCATCCAGACCGGTGGCTTCAATGACGGAGATCGTACTGTTAGGATGATTAGTCCTTGCCCCGACTGTGACTGGGAAGAAGTAGACGGCGGACTGGCAGAGCGAAGGTGGTATGCCACCAATCACATTCTTTCAGACGGACGTCAGATTATAGTTGGTGGCAGAAGAAAGTTCAACTACGAGTTTTATCCTAAATCAGACGCAAAAAATAGTTACATTCTACCGTTTCTTGTACAGACCAGTGATGCGGGCATAGAGAACAACTTGTACCCATTTGTTTTTCTGAACGTCGATGGCAACATGTTCATCTTTGCCAACAATCGAGCCATCTTACTGGATTTCGACAAGAACAAGGTGGTCAGGAACTACCCACAAATACCAGGTGGAGATCCCAGATCATATCCTATTACAGGGTCGGCAGTGTTATTACCTTTGAAGAATCTACAGGCCAAGACGGTCGAAGCAGAGGTAATGATTTGTGGTGGAGCACCGAGAGAGTCGTATGAGCAGGCCAACCAAGGTAAATTTCTCCTGGCTTTGAATACCTGTGCTCGGATCAAGATCACTGACCCGAACCCACAGTGGGTCATGGAGACAATGCATGGATCTAGAGTTATGAATGACATGGTAATGCTTCCTAACGGTAATGTCTTGATCATCAATGGAGAAGCTTCGGGGACGGCCGGATGGGAAGCGGGTCGCAACCCGGTGTTGAACCCATTTCTATACAAAACGAACAGCCCAGCTGGGTCTCTGTTCGAATTGCAAAACCCGACTAATATTCCACGGATGTACCACTCCACGGCTGTTCTGCTTCTCGACGGCCGCGTGGTTGTCGCCGGAAGCAATCCTCACGTATACTACAATTTCACTAATGTCTTATTTCCAACGGAGTTCAGATTGGAGACGTTTTCCCCATCGTATTTGGAGTCTGGATTCTTTAACGTGACGGCAACATTAGTTCAAAATATGGTGTCAGTGACGATGTTGTTGCCGCCATTTAATACACATTCGTTCTCCATGAATCAGAGGATGTCGGTGCTGGAGCCAAGCAAAGTGACGAATCCGGGAAGATCTGTGTATGAAGTTGAGGTCACCATGCCACCTTAG 1347 0.49 MHRQLLHHDRVIIFDRTDFGLSNLSLPNGRCRQNPKELVVKTDCTAHALEYDVTSNSFRPLFVHTDVWCSTGSVAPDGRLIQTGGFNDGDRTVRMISPCPDCDWEEVDGGLAERRWYATNHILSDGRQIIVGGRRKFNYEFYPKSDAKNSYILPFLVQTSDAGIENNLYPFVFLNVDGNMFIFANNRAILLDFDKNKVVRNYPQIPGGDPRSYPITGSAVLLPLKNLQAKTVEAEVMICGGAPRESYEQANQGKFLLALNTCARIKITDPNPQWVMETMHGSRVMNDMVMLPNGNVLIINGEASGTAGWEAGRNPVLNPFLYKTNSPAGSLFELQNPTNIPRMYHSTAVLLLDGRVVVAGSNPHVYYNFTNVLFPTEFRLETFSPSYLESGFFNVTATLVQNMVSVTMLLPPFNTHSFSMNQRMSVLEPSKVTNPGRSVYEVEVTMPP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0969 448 Pfam Galactose oxidase-like, Early set domain 393 448 IPR015202 -
Lele02g0969 448 Gene3D Immunoglobulins 388 448 IPR013783 -
Lele02g0969 448 PANTHER SECRETED PROTEIN-RELATED 1 448 - -
Lele02g0969 448 Gene3D - 1 387 IPR037293 -
Lele02g0969 448 SUPERFAMILY E set domains 390 448 IPR014756 -
Lele02g0969 448 SUPERFAMILY Galactose oxidase, central domain 49 389 IPR011043 -
Lele02g0969 448 Pfam Glyoxal oxidase N-terminus 1 241 IPR009880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0969 Lele-ChrLele02 5892073 5893492 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0969 02 5892073 5893492 Lele02g0969 02 5892073 5893492 ECH
Lele02g0969 02 5892073 5893492 Lele03g0963 03 5609117 5610748 hybridization
Lele02g0969 02 5892073 5893492 Lele04g0963 04 5952623 5954612 hybridization