Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0874 ATGGCTCCACTTTCTCTCTCTCCTTTGTCGCCTGCGTCCGCACCTTCTCGTCTTCTGTCTCACCGGCGAATCTTGGGTTGTCCTCCAAGATTCAGTTATGCTCCTGTTCCTGCAACGGAATTGCTGTCGCCGTCGACTTCGAATTTGACCCCGAAAGTTGTGCTCACCAGAGAGCGTGGCAAGAATGGCAAGCTTATCACTGCTCTGAATATATTCGTGTTTTATGGAATGGTTACTGAACACCATTCTGTCTTCAAGAATAAACTTAAAGTCAATTGTTTGGAATTTCCACTCATTGAGCACACATTGGGACCTGACTTGGATAGACTTGCTTCTGTATTAAGTGATAATTCATTTGATTGGATTGTCATTACATCCCCTGAAGCAGGTTCAGTTTTCCTAGAGGCATGGAGAGCTGCTGGGGCCCCCCATGTCAAAATAGGCGTTGTTGGAGCTGGTACTGCAAGTGTTTTCCAGGAAGCCTCACTGTCATCAAAGCAGTCACTTGATGTGGCCTTTTCACCATCAAAAGCAATAGGGAAGGTTTTAGCTACAGAGCTTCCAAAGAATGGAAATAAATGCACCGTGTTGTATCCTGCTTCTGCAAAAGCTAGCAATGAGATTGAGGAAGGACTTTCTAATCGTGGATTTGAGGTTACAAGGTTGAATACATACACAACGGTACCAGTTCAGCACGTTGACCAAGGAATCTTAAAGCAAGCACTTGATATACCTGTTGTTGCAGTAGCTTCACCATCTGCAATTCGAAATAGGTTGATGAATGTTCTTAGGAAGCTCTATGGTATTTACCCAATTCATGAATTCTGTTGTAACAGTGCCTGGAAGAATCTTATTTCAGAATCAGATTGGCCAGGATCTGTTGCATGCATCGGTGAGACTACTGCTGCAATGGCTAAAAGATTAGGGTTTGAACAAGTGTACTACCCATCTCAGCCTTGTGTTGAAGGCTGGGTAGATAGCATTCTCGATGCCTTGGGATCACATGATGATTCATTGAGGATGGATCTACTTCCTCTTCTCAGTAATGTGTTCTTGCGGTTACTGTCAGAGGCTATCGTAAGATCCCGTCGTAAAGAAATAATCAATGATGTAAATACCGTTGCTGACTTGCTAGACAAGCCCATAATCTGTCCACCATCGGCTTCATACGATGTATCGCTTAAATCTGGGCCTCTGCGGGTAGCGGTGGCAACTCTACTCTACTCTCCTCTCCCTCCTCGTCTTCATCGTCTTTCCTTTCTCCCCCTTGCTTTTGATTCCCATTCCTTCCGCTATTCTTCTTGGCATCCACCATTTGTAATCTTTACAGCTCCTTTTGCCTCGCATTCGCTGAGGCTTGCTAGTACTGATGGTTTGTTCGAGTGGATTCTGACCTCTTTAGCGTTGAATGAAAAGGCAGAAATGCAGGGCAGCTTGCAAAAGGGCACTGCTAATAAAGTCGAAGGTGGAAAAGCCTCTGACTCCGAATTTCAGATTCATGAGCTGAAAAAGAAGCTTAGACATGAAGAGAACATCCACAGAGCATTGGAGAGGTCTTTTAACAGACCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCCGCCTGCATACTAGCGCTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTGGTACAATCCAGGCAGGACTTGTACCAGGAAGCTGTCTACTTGTCATCTTCTAAGAGAAGAATGGAGCGTTCAGCTAATGTAAACAATGCTAATTCAGTTGAAAGCCCAAGACAGGTCAAATTGAAGTCTTATTCCCATACAATGAATAGCCCAGCAACATCTAAAACTAGGCTTACGACAACATTACCAGAGGATCGGCAAGGAAAGGAGAATGAATCCTGCACTAATTCTTTTAAGAGAAGCAAGCATTTTTCATGTGACAACCAAACAACTAAAATTCCAATCAAGAAACTTTCAACTGACAATAAATCAGGGAAGAAGTGTTGGGATCCTCGTAAGAGACAGCAAGAATTAAGGGTGAAAAACAAATCAATTGCAGAAGAAGGGAATCCTAGTCCACATGAAAAAGCAGGGGGAGATGACAGCCCTAATATTATTTCAGAAAATATTTTGAAGTGCTTATCAACCATCCTCATGAGAATGAGTTCAGTGAAGAATCCAGGTCCTGCAGGTGACATTGAAGGTTGGGATCCATATGGTACCCGTTTGGGATTTGGGAAGCAGGATATTGGTCCATATAATCAACTATGTGCAATTGAAGCCAGATCTTTCAATCCAAAACGAACCGCAAATTCTTTGATTTTGCTGTGTAGATTAAAAATTCTTTTGAGGAAACTTGCCTCTGTCAAGTTAGAAAACCTCAACCACCAGGAGAAACTTGCATTCTGGATCAACATCTATAACTCCTGCATGATGAACGCCTTCATAGAGGATGGCATTCCTGAGAGTCCTGAAATGGTTGTTTCACTGATGCGGAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGTGCAATCACTATCGAACATTTCATCCTAAGACTTCCTTACCACTGGAAATGTACGTTTCTGAAGGGAGCAAAGAATCATGAAATGACAGCAAGAACCATATTTGGACTGGAATTGTCAGAACCTCTAGTGACATTTGCACTCGCCTGTGGAACTTGGTCCTCTCCTGCTGTTGAGAACCAGCTGGAAGTTGCCAAAAAGGAGTACTTGCAGGCTGCAATTTGTATTTCAACGACCAAGATTTCTATCCCAAAACTACTTGATTGCCTCTCATTTGTTGAGACAAGACCTCCATGTGAACGTATCACTGCTCAATATTTTCTGATGACTGAACTCATCATCGTCTTGGAACCTTTAGGTCAACATCAAGCATTTCGGCAAAACCCTGAAAACCAGATTTACCGGTCTGATAACTTGATCTGA 2949 0.4334 MAPLSLSPLSPASAPSRLLSHRRILGCPPRFSYAPVPATELLSPSTSNLTPKVVLTRERGKNGKLITALNIFVFYGMVTEHHSVFKNKLKVNCLEFPLIEHTLGPDLDRLASVLSDNSFDWIVITSPEAGSVFLEAWRAAGAPHVKIGVVGAGTASVFQEASLSSKQSLDVAFSPSKAIGKVLATELPKNGNKCTVLYPASAKASNEIEEGLSNRGFEVTRLNTYTTVPVQHVDQGILKQALDIPVVAVASPSAIRNRLMNVLRKLYGIYPIHEFCCNSAWKNLISESDWPGSVACIGETTAAMAKRLGFEQVYYPSQPCVEGWVDSILDALGSHDDSLRMDLLPLLSNVFLRLLSEAIVRSRRKEIINDVNTVADLLDKPIICPPSASYDVSLKSGPLRVAVATLLYSPLPPRLHRLSFLPLAFDSHSFRYSSWHPPFVIFTAPFASHSLRLASTDGLFEWILTSLALNEKAEMQGSLQKGTANKVEGGKASDSEFQIHELKKKLRHEENIHRALERSFNRPLGALPRLPPYLPACILALLAEVAVLEEEIVRLEEQVVQSRQDLYQEAVYLSSSKRRMERSANVNNANSVESPRQVKLKSYSHTMNSPATSKTRLTTTLPEDRQGKENESCTNSFKRSKHFSCDNQTTKIPIKKLSTDNKSGKKCWDPRKRQQELRVKNKSIAEEGNPSPHEKAGGDDSPNIISENILKCLSTILMRMSSVKNPGPAGDIEGWDPYGTRLGFGKQDIGPYNQLCAIEARSFNPKRTANSLILLCRLKILLRKLASVKLENLNHQEKLAFWINIYNSCMMNAFIEDGIPESPEMVVSLMRKATINVGGHLLSAITIEHFILRLPYHWKCTFLKGAKNHEMTARTIFGLELSEPLVTFALACGTWSSPAVENQLEVAKKEYLQAAICISTTKISIPKLLDCLSFVETRPPCERITAQYFLMTELIIVLEPLGQHQAFRQNPENQIYRSDNLI 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0874 982 MobiDBLite consensus disorder prediction 655 703 - -
Lele04g0874 982 MobiDBLite consensus disorder prediction 602 620 - -
Lele04g0874 982 SUPERFAMILY HemD-like 88 331 IPR036108 GO:0004852|GO:0033014
Lele04g0874 982 PANTHER EXPRESSED PROTEIN 494 930 - -
Lele04g0874 982 MobiDBLite consensus disorder prediction 621 636 - -
Lele04g0874 982 FunFam Uroporphyrinogen-III synthase, chloroplastic 113 219 - -
Lele04g0874 982 MobiDBLite consensus disorder prediction 602 640 - -
Lele04g0874 982 Pfam Uroporphyrinogen-III synthase HemD 91 325 IPR003754 GO:0004852|GO:0033014
Lele04g0874 982 Gene3D - 113 219 IPR036108 GO:0004852|GO:0033014
Lele04g0874 982 Coils Coil 538 565 - -
Lele04g0874 982 Coils Coil 499 519 - -
Lele04g0874 982 MobiDBLite consensus disorder prediction 658 694 - -
Lele04g0874 982 CDD HemD 53 328 IPR003754 GO:0004852|GO:0033014
Lele04g0874 982 Gene3D - 220 331 IPR036108 GO:0004852|GO:0033014
Lele04g0874 982 Pfam Leucine-zipper of ternary complex factor MIP1 498 569 IPR025757 -
Lele04g0874 982 Pfam Protein of unknown function, DUF547 791 911 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0874 Lele-ChrLele04 5342948 5356877 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0874 04 5342948 5356877 Lele04g0874 04 5342948 5356877 ECH
Lele01g0874 01 5045064 5064197 Lele04g0874 04 5342948 5356877 hybridization
Lele02g0857 02 5201901 5207080 Lele04g0874 04 5342948 5356877 hybridization