Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0857 ATGGCTCCACTTTCTCTCTCTCCTTTGTCGTCTGCGTCCGCACCTTCTCGTCTTCCGTCTCACCGGCGAATCTTGGGTTGTCCTCCAAGATTCAGTTATGCTCCTGTTCCTGCAACGGAATTGCTGTCGCCGTCGACTTCGAATTTGACCCCGAAAGTTGTGCTCACCAGAGAGCGTGGCAAGAATGGCAAGCTTATTACTGCTCTGAATAAACATAAAGTCAATTGTTTGGAATTTCCACTCATTGAGCACACTTTGGGACCTGACTTGGATAGACTTGCTTCTGTATTAAGTGATAATTCATTTGATTGGATTGTCATAACATCCCCTGAAGCAGGTTCAGTTTTCCTAGAGGCATGGAGAGCTGCTGGGGCCCCCCATGTCAAAATAGGCGTTGTTGGAGCTGGTACTGCAAGTGTTTTCAAGGAAGCCTCACTGTCATCAAAGCAGTCACTTGATGTGGCCTTTTCACCATCAAAAGGGAAGGTTTTGGCTACAGAGCTTCCAAAGAATGGAAATAAATGCACTGTGTTGTATCCTGCTTCTGCAAAAGCTAGCAATGAGATTGAGGAAGGACTTTCTAATCGTGGATTTGAGGTTACAAGGTTGAATACATACACAACGGTACCAGTTCAGCACGTTGACCAAGGAATCTTAAAGCAAGCACTTGATATACCTGTTGTTGCAGTAGCTTCACCATCTGCAATTCGTGTCTGGAAGAATCTTATTTCAGAATCAGATTGGACTGGATCTGTTGCATGCATCGGTGAGACTACAGCTGCAATGGCTAAAAGATTAGAGTTTGAACAAGTGTACTACCCATCTCAGCCTTGTGTTGAAGGCTGGGTAGATAGCATTCTCGATGCCTTGGGATCACATGATGATTCATTGAGCGGTCATACAGCGCTTCGACATATGGAGGATGGATCTACTTCCTCTTCTCAGTAA 948 0.4515 MAPLSLSPLSSASAPSRLPSHRRILGCPPRFSYAPVPATELLSPSTSNLTPKVVLTRERGKNGKLITALNKHKVNCLEFPLIEHTLGPDLDRLASVLSDNSFDWIVITSPEAGSVFLEAWRAAGAPHVKIGVVGAGTASVFKEASLSSKQSLDVAFSPSKGKVLATELPKNGNKCTVLYPASAKASNEIEEGLSNRGFEVTRLNTYTTVPVQHVDQGILKQALDIPVVAVASPSAIRVWKNLISESDWTGSVACIGETTAAMAKRLEFEQVYYPSQPCVEGWVDSILDALGSHDDSLSGHTALRHMEDGSTSSSQ 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0857 315 SUPERFAMILY HemD-like 51 289 IPR036108 GO:0004852|GO:0033014
Lele02g0857 315 PANTHER UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC 8 294 IPR039793 GO:0004852|GO:0006780
Lele02g0857 315 MobiDBLite consensus disorder prediction 1 17 - -
Lele02g0857 315 Gene3D - 96 200 IPR036108 GO:0004852|GO:0033014
Lele02g0857 315 CDD HemD 53 286 IPR003754 GO:0004852|GO:0033014
Lele02g0857 315 Pfam Uroporphyrinogen-III synthase HemD 65 283 IPR003754 GO:0004852|GO:0033014
Lele02g0857 315 Gene3D - 201 289 IPR036108 GO:0004852|GO:0033014
Lele02g0857 315 MobiDBLite consensus disorder prediction 1 20 - -
Lele02g0857 315 FunFam Uroporphyrinogen-III synthase, chloroplastic 96 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0857 Lele-ChrLele02 5201901 5207080 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0857 02 5201901 5207080 Lele02g0857 02 5201901 5207080 ECH
Lele02g0857 02 5201901 5207080 Lele03g0871 03 5071814 5076452 hybridization
Lele02g0857 02 5201901 5207080 Lele04g0874 04 5342948 5356877 hybridization