Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0874 ATGCTTTTATATCTGCCTTTAAAGCTTTTCTGTTATTATATCCTCCGGTTCACTGCATATGCATTCACTGAAAATGAACACTCTTATTTTTATTTATTTTGGGGTGGGATGAATGTCAGTGCAGTACTGCTGTCTGAAGATTCGGCGGAGTTTCCCCCGAAATATCCAGATTCAGACCAGAAAATGCAAAAGAGATCAAAGGAAGGACTAGAAATAGGTCATAAAAGGCCTAGAAAAGGATCAGGGTGGATGAGCTGGCAAGTGTTGGGACCAGGGGTGCACAGCAGCTTAGGGTTGGCATTCTGTGCCTCACACGTTTCAATGGCTCCACTTTCTCTCTCCTCTTTGTCGTCTGCGTCCTCACCTTCTCGTCTTATGTCTCACCGGCGAATCTTGGTTTGTCCTCCAAGATTCAGTTATGTTTCTGTTCCTGCAACGGAATCGCTCTCACCGGCGACTTCGAATTTGTCCCCGAAAGTTGTGGTCACCAGAGAGCGTGGCAAGAATGGCAAGCTCATCAGTGCTCTGAATAAACACAAAGTCAATTGTTTGGAGTTTCCACTTATTGAGCACACTTTGGGACCTGACTTGGATAGACTTGCTTCTGTATTAAGTGATAATTCCTTTGATTGGATTGTCATAACATCCCCTGAAGCAGGTTCAGTTTTCCTAGAGGCATGGAGAGCTGCTGGGGCCCCCCATGTCAAAATAGGCGTTGTTGGAGCTGGTACTGCAAGTGTTTTCAAGGAAGCCTCACTGTCATCAAAGCAGTCACTTGATGTGGCCTTTTCACCATCAAAAGCAACAGGGAAGGTTTTGACTACGGAGCTTCCAAAAAGTGGAAATAAATGCACTGTGTTGTATCCTGCTTCTGCCAAAGCTAGCAATGAGATTGAGGAAGGACTTTCTAATCGTGGATTTGAGGTTACAAGGTTGAATACATACACAACGGTACCTGTTCAGCACGTTGATCAAGGAATCTTTAAGCAGGCACTTAATATTCCTGTTGTTGCAGTAGCTTCACCATCTGCAATCCGTGCCTGGAAGAATCTTATTTCAGAATCAGATTGGACTGGATCTGTTGCGTGCATCGGTGAGACTACTGCTGCAATGGCTAAAAGATTAGGGTTTGAACATGTGTACTACCCTTGTCAGCCAGGCGTTGAAGGCTGGGTAGATAGCATTCTCGATGCCTTGGGATCACACGATGATTCATTAAGGCCCCACACTGATAAAGAAGCTTCTTGTGGCTCCCATTATCTGTATCTGGAAGACGTGATGTTTCTGCGAATGGCATGCCTTTTGTATAGAGGTTACGATCTTCCTGAAGCCAGAAGGTATCACTAGGTTCGATCCTTATACGGACAATTCGTTAGCGTTTCGATGATTTTGTGTTCTGAGAAATGGATGCTGTATATGCGATTTGTTTTCCAAGTTTATAATTCGGTGGTTGCAGATTTAGTAGAGCTGGAAAAGATGAACACCAAAGCCAGGACTAGGCTGTGGATTCTGACCTCTTCAGCCTTGAATGAAAAGGCAGAAATGCAGGGAAGCTTGAGAAAGGGCGCTGCTAATAAAGTCGAAGGTGGAAAAGCTTCTGGTAAAGATAGAATATCGGCATTGCAACAAGATATTCATGAGCTGAAAAAGAAGCTTAGACATGAAGAGAACATCCACAGAGCATTGGAGAGGGCTTTTAACAGACCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCCTCCTGCATACTAGAGCTTCTGGCTGAAGTAGCAGTTCTGGAAGAGGAAATTGTTAGGCTTGAAGAGCAGGTAGTACAATCCAGGCAGGACTTGTACCAGGAAGCTATCTACTTGGCATCTTCTAAGAGAAGAATGGAGGGTTCGGCTAATGTAAACAATGCTAATTCAGTTGAAAGCCCAAGACAGGTCAAATTGAAGTCTTCTTCCCGTACAATGAATAGCCCAGCAAAATCTAAAACTAGGCTTGTGACAACATTACCAGAGGATCATGAAGGAAAGGAGAATGAGTCCTGCACTAATTCTTTTAAGAAAAGCAAGCATTTTTCGTGTAAAAACCAAACAACTAAAATTCCAATCAAGAAACTCTCAACTGACAATAAATCAGGGCAGAAGTGTTGGGATCCTCGTAAGAGACAGGTAGGGAATCCTAGTCCACATGAAAAAGCACTGGGAAACGACAGCCCTAATATTATTTCAGAAAATATTTTGAAGTGCTTATCAACCATCCTCATGAGAATGAGTTCAGTGAAGAATCCAGGTCCTGCACGTGACATTGAAGGATGGGATCCATATGGTACCTGTTTGGGATTTGGGAAGCAGGATATTGGTCCATATAATCAACCATGCTCAATTGAAGCCAGATCTTTCAATCCAAAACGAACCGCAAATTCTTTGATTTTGTTGTGCAGATTGAAAATTCTTTTGAGGAAACTTGCCTCTGTCAAGTTAGAGAACCTCAACCACCAGGAGAAACTTGCATTCTGGATCAACATCTATAATTCCTGCATAATGAACGCCTTCATAGAGAATGGCATTCCTGAGAGTCCTGAACTGGTTGTTTCACTGATGCGGAAGGCGACAATAAATGTGGGTGGACACTTGCTAAGTGCAAACACTATCGAACATTTCATCCTAAGACTTCCTTACCACTGGAAATGTACGTTTCTGAAGGGAGCAAAGAATCATAAAATAACGGCAAGAAGCATATTTGGACTGGATTTGCCAGAACCTCTAGTGACATTTGCACTCTCCTGTGGAACTTGGTCCTCTCCTGCTGTGAGGATTTATACGGCGTCACAGGTTGAGAACCAGCTGGAAATTGCAAAAAGGGAGTACTTGCAGGCCGCAATTTGTATTTCAACGACCGAGATTGCTATCCCGAAACTACTTGATTGCCTCCCATATGTTGGGCCGAGACCTCCAGGTGAACGTATCACTGCTCAATATTATCTGATGATTGAACTCATCATCGTCTTGGAGCCTTTAGGTCGGCATCAAGCATTTCAGCAAAACCATGAAAACCAGATTTACCGGTCTGATGACTTGATATGA 3075 0.4358 MLLYLPLKLFCYYILRFTAYAFTENEHSYFYLFWGGMNVSAVLLSEDSAEFPPKYPDSDQKMQKRSKEGLEIGHKRPRKGSGWMSWQVLGPGVHSSLGLAFCASHVSMAPLSLSSLSSASSPSRLMSHRRILVCPPRFSYVSVPATESLSPATSNLSPKVVVTRERGKNGKLISALNKHKVNCLEFPLIEHTLGPDLDRLASVLSDNSFDWIVITSPEAGSVFLEAWRAAGAPHVKIGVVGAGTASVFKEASLSSKQSLDVAFSPSKATGKVLTTELPKSGNKCTVLYPASAKASNEIEEGLSNRGFEVTRLNTYTTVPVQHVDQGIFKQALNIPVVAVASPSAIRAWKNLISESDWTGSVACIGETTAAMAKRLGFEHVYYPCQPGVEGWVDSILDALGSHDDSLRPHTDKEASCGSHYLYLEDVMFLRMACLLYRGYDLPEARRYHXVRSLYGQFVSVSMILCSEKWMLYMRFVFQVYNSVVADLVELEKMNTKARTRLWILTSSALNEKAEMQGSLRKGAANKVEGGKASGKDRISALQQDIHELKKKLRHEENIHRALERAFNRPLGALPRLPPYLPSCILELLAEVAVLEEEIVRLEEQVVQSRQDLYQEAIYLASSKRRMEGSANVNNANSVESPRQVKLKSSSRTMNSPAKSKTRLVTTLPEDHEGKENESCTNSFKKSKHFSCKNQTTKIPIKKLSTDNKSGQKCWDPRKRQVGNPSPHEKALGNDSPNIISENILKCLSTILMRMSSVKNPGPARDIEGWDPYGTCLGFGKQDIGPYNQPCSIEARSFNPKRTANSLILLCRLKILLRKLASVKLENLNHQEKLAFWINIYNSCIMNAFIENGIPESPELVVSLMRKATINVGGHLLSANTIEHFILRLPYHWKCTFLKGAKNHKITARSIFGLDLPEPLVTFALSCGTWSSPAVRIYTASQVENQLEIAKREYLQAAICISTTEIAIPKLLDCLPYVGPRPPGERITAQYYLMIELIIVLEPLGRHQAFQQNHENQIYRSDDLI 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0874 1024 FunFam Uroporphyrinogen-III synthase, chloroplastic 203 309 - -
Lele01g0874 1024 PANTHER EXPRESSED PROTEIN 525 972 - -
Lele01g0874 1024 Coils Coil 584 611 - -
Lele01g0874 1024 Gene3D - 203 309 IPR036108 GO:0004852|GO:0033014
Lele01g0874 1024 Pfam Protein of unknown function, DUF547 825 954 IPR006869 -
Lele01g0874 1024 SUPERFAMILY HemD-like 159 400 IPR036108 GO:0004852|GO:0033014
Lele01g0874 1024 MobiDBLite consensus disorder prediction 706 734 - -
Lele01g0874 1024 CDD HemD 160 395 IPR003754 GO:0004852|GO:0033014
Lele01g0874 1024 Pfam Uroporphyrinogen-III synthase HemD 172 392 IPR003754 GO:0004852|GO:0033014
Lele01g0874 1024 Gene3D - 310 398 IPR036108 GO:0004852|GO:0033014
Lele01g0874 1024 Coils Coil 531 565 - -
Lele01g0874 1024 Pfam Leucine-zipper of ternary complex factor MIP1 535 615 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0874 Lele-ChrLele01 5045064 5064197 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0874 01 5045064 5064197 Lele01g0874 01 5045064 5064197 ECH
Lele01g0874 01 5045064 5064197 Lele03g0871 03 5071814 5076452 hybridization
Lele01g0874 01 5045064 5064197 Lele04g0874 04 5342948 5356877 hybridization