Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0659 ATGCTTTCGCTAGGAAATTGGATAAAACTAATTCAAATTTCATCTGACATACTTTTTCGTTTTTGTTTTGCCAACAGAAACATCTGGACTTTACTCTTAAGCTTCCATGAGTTAAAACCAGTTGGAATACTAGAAGTAAAACTAGTGCAAGCAAAGGAATTGGCAAATAAAGATATGATTGACAAATCCGATCCTTTTGCCACTTTATTCGACAACGAGTTGAATCCAGTATGGAACGAGAACTTCCAGTTCACCGTGGAAGATGCATCAACTCAGCACTTGACTGTAAGAATATTTGATGATGAAGGCGTTGGGGCTGACCAGCTCATTGGGTGTGGCCAAGTGCCATTAACGGACCTTCAACCTGGAAAAGTTGAGACCTTCTGGTTGAATCTGGTCAAGGATTTGGAGGTGCACTTGGAGATATTGTACTGTCCATTTGGTGTGGAAAGCAACTTTACAAGCCTGTTTAGTGGTAGCTTTGGGCTGACCACTTTCGAGAAGACGATTAAGAGTGCATCTGAGCAGACAGAGGGCGGTGATGTTAACAAATCACGGAGAAAATATGTGATAGTGAGAGGATTATTATCTGTGACAGTGATATCAGCTGAAGAACTACCAAATATGGACTTACTGGGAAAAACTAACTCTTGTGTTGAACTCATGTTGAAGAAAGCAGACCAAAAACACAGGACCAGGGTTGCAACTTCAGGAGTAAACCCTGATTGGAATCAAACATTTGACTTCGTTGTGAGGGATGTGTTACATGAAATGCTAATTCTTGAAGGCTGGGATCAAGATCTCATTGGAAAGTACAAAATTGGAAGAGTGACGATGACACTGACAAGGGTAATCATAAAAAAGGAAGTTCAGGAAAGTTTTGCGTTGGGTGGCGCCAAATCTGGGAAACTTAACCTGCATCTTAGCTGGACTCCACAACTCATGGTCACCTTCTGCCTCCACCTACCTGTTCTCTCCCTCACTCCCAAATCAACTACCTTTAGATCCTCATTCTCAGCTGTTATGGATCAGCCTCAGACCCGAAATACGGATACCCAACGTCTCCTAACCCTGTTAGAAGCTCTCAAAGAAGCTTCCAAAGATCTTCGAGCCAATTCCGTCCCTTTTCTCTTCAAGAATGACTCCAAGGTCGCCATTGAAGCTATTCTGGAGCTCGAAAGCAAGGCACTCGCGGTTTTCTCGGCCAATCCGGATCTTCGCAAGCTCTCTGAGTTGCTCCGTTCCCTCAGAGCCTTGATCGAGAAGCTTCAGAAATATGAAGGTTTTGGGCTCCGATCGCTCCTCAACCGCCAAATCACCAATTACAAGATTTCCCGTGTTGCATGTGATATTGAGTCCGAAATTCAAGCGTACGTTGATCGATTAACCATTGGAGGACTCGTCAAAACCCTGGTAGAATCGGCGAACGAGGACGTCAAGGTGAAGGCTCTGATTGGTTTTGAGAAAAGATTGTCGCGGGGTTTTGATATAGATTTTCAAGATTTAATTTTAAAGGCCAAGGTATTCAATATTCTTGAGCATATACTCACTGATCCGTCGAGTTCAAAACGGGTTCGGGAACGAGCGGCCATGGCTATCGACGCTTTAGTTGGGTTCAACAAGAATGTATTTGTCGGATTGGTGCTAATGGGTCCAACGGTCAAGTCCCTAATAGCAATGGGTTCAAGCTGTTCGATACAAGTCCTGTCATCTCTGATAAGGTTCATTAGAAGCCCGTTGGTGGATGAACTTCTGGCAATTGGAGAAATCCCAAGAATCGTCAACCTTTTATGTTCGGACGATTTGTCAGTTCAAGTTGCAGCCTTGGATTGCGTCCTTGAGCTTGCTTATATCGGGAGAGATGAAGTAATTGAAGCTATGCTGGAACAAGACCTGATTAAAAAGCTCATGGACTTGCAAAGAATGGATTGGCGTGACGAGAAGGAGAGAGAGGTTTGTATAGGAACAGAGTCAGAATCCCAATTGAAGGATTTTCCATTTGCAAGTTGTGTTGCAAGGTTTGCTATCCAATTAGAAGTGGGGGAAGGATTGAGCAAGGAGGAGAAAAAAGAGTTTAAGTTACGGATCCTGAAGATGGTGAAGGAGGCTGCTCAATCAGATGCGGAGGTTGCCACCATAAACGCTGAAGTGCTATGGGGTTCTTCACCCTGA 2172 0.4383 MLSLGNWIKLIQISSDILFRFCFANRNIWTLLLSFHELKPVGILEVKLVQAKELANKDMIDKSDPFATLFDNELNPVWNENFQFTVEDASTQHLTVRIFDDEGVGADQLIGCGQVPLTDLQPGKVETFWLNLVKDLEVHLEILYCPFGVESNFTSLFSGSFGLTTFEKTIKSASEQTEGGDVNKSRRKYVIVRGLLSVTVISAEELPNMDLLGKTNSCVELMLKKADQKHRTRVATSGVNPDWNQTFDFVVRDVLHEMLILEGWDQDLIGKYKIGRVTMTLTRVIIKKEVQESFALGGAKSGKLNLHLSWTPQLMVTFCLHLPVLSLTPKSTTFRSSFSAVMDQPQTRNTDTQRLLTLLEALKEASKDLRANSVPFLFKNDSKVAIEAILELESKALAVFSANPDLRKLSELLRSLRALIEKLQKYEGFGLRSLLNRQITNYKISRVACDIESEIQAYVDRLTIGGLVKTLVESANEDVKVKALIGFEKRLSRGFDIDFQDLILKAKVFNILEHILTDPSSSKRVRERAAMAIDALVGFNKNVFVGLVLMGPTVKSLIAMGSSCSIQVLSSLIRFIRSPLVDELLAIGEIPRIVNLLCSDDLSVQVAALDCVLELAYIGRDEVIEAMLEQDLIKKLMDLQRMDWRDEKEREVCIGTESESQLKDFPFASCVARFAIQLEVGEGLSKEEKKEFKLRILKMVKEAAQSDAEVATINAEVLWGSSP 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0659 723 SUPERFAMILY ARM repeat 466 655 IPR016024 -
Lele04g0659 723 CDD C2 196 292 - -
Lele04g0659 723 ProSiteProfiles C2 domain profile. 1 130 IPR000008 -
Lele04g0659 723 SMART C2_3c 43 129 IPR000008 -
Lele04g0659 723 SMART C2_3c 195 293 IPR000008 -
Lele04g0659 723 Gene3D C2 domain 177 313 IPR035892 -
Lele04g0659 723 Gene3D C2 domain 33 146 IPR035892 -
Lele04g0659 723 CDD C2 44 132 - -
Lele04g0659 723 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 39 145 IPR035892 -
Lele04g0659 723 PANTHER ARMADILLO-TYPE FOLD PROTEIN-RELATED 346 723 - -
Lele04g0659 723 Coils Coil 406 426 - -
Lele04g0659 723 Pfam C2 domain 195 293 IPR000008 -
Lele04g0659 723 Pfam C2 domain 42 132 IPR000008 -
Lele04g0659 723 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 188 314 IPR035892 -
Lele04g0659 723 ProSiteProfiles C2 domain profile. 176 294 IPR000008 -
Lele04g0659 723 Gene3D - 436 656 IPR011989 -
Lele04g0659 723 FunFam Extended synaptotagmin-2 173 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0659 Lele-ChrLele04 3983505 3987184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0659 74 330 Lipid Metabolism Gene Families AT5G12970 23.466 3.03e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0659 04 3983505 3987184 Lele25g0631 25 3981205 3983952 CCT
Lele04g0659 04 3983505 3987184 Lele26g0642 26 4077546 4079954 CCT
Lele04g0659 04 3983505 3987184 Lele27g1457 27 20701572 20704112 CCT
Lele04g0659 04 3983505 3987184 Lele28g0626 28 3994453 3996857 CCT
Lele04g0659 04 3983505 3987184 Lele04g0659 04 3983505 3987184 ECH
Lele01g0653 01 3821234 3824028 Lele04g0659 04 3983505 3987184 hybridization
Lele02g0640 02 3833514 3836114 Lele04g0659 04 3983505 3987184 hybridization