Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0583 ATGGCGTGCGCCATCTCATCGGGTCGTTTCTTTCTTATCCCCTCTTCTGGTCCGAACCTCATTCTCTCAAGCAGACGAGTTAGGGCTACACAGACATTTCTCTGGAATCGTGTGAGTAGACTCAGTTCGCGCTCGATGAGTCAACCCGCTTCTGGGTCCTCCACCGATCCCATCAGTGCTTCCTCTGAAAATGACAAGACGCAGGCGGAAATCGCCGATGTGATTGTGCAGTATGTGGTGCTCCGACGAGACCTGATTGACACTTGGCCCCTTGGAAGTGTGGTTACACAAGGCTGCCATGCTTCTGTGTCCGCCGTCTGGTCCAATAAAGATGACCCTCACACCGTCGATTACTGCGGCCCCGAGAAAATCGATTCTATGCATAAGGTCACACTTGAAGTGAAAGGAGAACCTCAGATTTTAAACTTGTCCGAGAAGCTCACATCCGGTGGCATTGTTCACAAGATGTGGATTGAACAGCCTGAAAACATACCAACATGCCTTGCAACAAAACCTTACCCAAAATCAATGATATCTTCGTATTTTAAGAAATTGAAACTTTGCAAGTGA 570 0.4825 MACAISSGRFFLIPSSGPNLILSSRRVRATQTFLWNRVSRLSSRSMSQPASGSSTDPISASSENDKTQAEIADVIVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKDDPHTVDYCGPEKIDSMHKVTLEVKGEPQILNLSEKLTSGGIVHKMWIEQPENIPTCLATKPYPKSMISSYFKKLKLCK 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0583 189 MobiDBLite consensus disorder prediction 45 65 - -
Lele04g0583 189 CDD PTH2_like 75 188 - -
Lele04g0583 189 SUPERFAMILY Peptidyl-tRNA hydrolase II 75 188 IPR023476 -
Lele04g0583 189 Pfam Peptidyl-tRNA hydrolase PTH2 76 188 IPR002833 GO:0004045
Lele04g0583 189 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 42 189 IPR042237 -
Lele04g0583 189 Gene3D Bit1 75 189 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0583 Lele-ChrLele04 3529655 3530787 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0569 01 3366914 3368234 Lele04g0583 04 3529655 3530787 hybridization
Lele02g0564 02 3392351 3393489 Lele04g0583 04 3529655 3530787 hybridization