Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0569 ATGGCGTGCGCGACAGCATCGGGTCGTTTCTTTGTTGGTCCCTCTTGTGGTGCTAACCTCATCTTCTCTAGTACGAGAGTCAGGGCTACACAGACATTTATCTGGAATCGGGTGAGTAGACTCAGCTCACGCTCGATGAATCCACCCGCTTCTGTGTCTTCCACAGATCCCATCGCTTCCTCTGAAAACGACAAGTCGCAGGCGGAAATCGCCGATGTTATATTGCAGTATGTGGTGCTCCGGCGAGACCTGATTGACACTTGGCCTCTTGGAAGTGTGGTTACACAAGGTTGCCATGCTTCTGTGTCGGCCATTTGGTCCAATAAAGATGACCCTCACACCGGCTATTACTGCAGCCCCGAGAAAATCGATTCTATGCACAAGGTCACACTTGAAGTGAAAGGAGAACCTCAGATTTTGAACTTGTCCGAGAAGCTCACATCCGGTGGCATTGTTCACAAGTTGTGGATTGAACAACCTGAAAACATACCAACATGCCTTGCAACAAAACCTTATCCAAAATCAATGGTATCTTCGTATTTTAAGAATTTGAAACTTTGCAAGAAATGCGCTGAAATGTTATGCAAAGTGCTTGTTTTTCTGGCCATATTCTCTTATACTGTTAAACAGATTTCAAATGGAGCAGCTGATTAG 654 0.4572 MACATASGRFFVGPSCGANLIFSSTRVRATQTFIWNRVSRLSSRSMNPPASVSSTDPIASSENDKSQAEIADVILQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPHTGYYCSPEKIDSMHKVTLEVKGEPQILNLSEKLTSGGIVHKLWIEQPENIPTCLATKPYPKSMVSSYFKNLKLCKKCAEMLCKVLVFLAIFSYTVKQISNGAAD 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0569 217 MobiDBLite consensus disorder prediction 43 64 - -
Lele01g0569 217 CDD PTH2_like 74 187 - -
Lele01g0569 217 Pfam Peptidyl-tRNA hydrolase PTH2 76 187 IPR002833 GO:0004045
Lele01g0569 217 Gene3D Bit1 74 187 IPR023476 -
Lele01g0569 217 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 43 188 IPR042237 -
Lele01g0569 217 SUPERFAMILY Peptidyl-tRNA hydrolase II 75 187 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0569 Lele-ChrLele01 3366914 3368234 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0569 01 3366914 3368234 Lele03g0575 03 3402222 3403545 hybridization
Lele01g0569 01 3366914 3368234 Lele04g0583 04 3529655 3530787 hybridization