Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0564 ATGGCGTGCGCCATCGCCATATCATCGGGTCGTTTCTTTCTTATCCCCTCTTCTGGTCCAAACCTCATTCTCTCAAGCAGACGAGTTAGGGCTACACAGACATTACTCTGGAATCGTGTGAGTAGACTCAGTTCGCGCTCGATGAGTCAACCCGCTTCTGGGTCCTCCACCGATCCCATCACCGCTTCCTCTGAAAATGGCAAGATGCAGGCCGAAATCGCCGATGTGATTGTGCAGTATGTGGTGCTCCGGCGAGACCTGATTGACACTTGGCCCCTTGGAAGTGTGGTTACACAAGGCTGCCATGCTTCTGTGTCCGCCGTCTGGTCCAATAAAGATGACCCTCACACCGTCGATTACTGCAGCCCCGAGAACATCGATTCTATGCACAAGGTCACACTTGAAGTGAAAGGAGAACCTCAGATTTTAAACTTGTCCGAGAAGCTCACATCTGGTGGCATTGTTCACAAGTTGTGGATTGAACAGCCTGAAAACATAGCAACGTGCCTTGCAACAAAACCTTACCCAAAATCAATGGTATCTTCGTATTTTAAGAAATTGAAACTTTGCAAGTGA 576 0.4878 MACAIAISSGRFFLIPSSGPNLILSSRRVRATQTLLWNRVSRLSSRSMSQPASGSSTDPITASSENGKMQAEIADVIVQYVVLRRDLIDTWPLGSVVTQGCHASVSAVWSNKDDPHTVDYCSPENIDSMHKVTLEVKGEPQILNLSEKLTSGGIVHKLWIEQPENIATCLATKPYPKSMVSSYFKKLKLCK 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0564 191 Pfam Peptidyl-tRNA hydrolase PTH2 78 190 IPR002833 GO:0004045
Lele02g0564 191 CDD PTH2_like 77 190 - -
Lele02g0564 191 Gene3D Bit1 77 190 IPR023476 -
Lele02g0564 191 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 44 191 IPR042237 -
Lele02g0564 191 SUPERFAMILY Peptidyl-tRNA hydrolase II 77 190 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0564 Lele-ChrLele02 3392351 3393489 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0564 02 3392351 3393489 Lele03g0575 03 3402222 3403545 hybridization
Lele02g0564 02 3392351 3393489 Lele04g0583 04 3529655 3530787 hybridization