Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0570 ATGGATCATAACGCCGATATCAACGCCCCTCATTCCATGGGAACCACCATTATCGGCCTCACTTACAATGGCGGCGTGGTTCTCGGAGCTGACTCTCGAACCAGCACCGGAGTGTATGTTGCAAACCGGGCATCAGACAAAATTACGCAGTTGACTGATAATGTCTATGTTTGTCGCTCTGGATCGGCTGCTGATTCTCAGATTGTATCTGATTATGTGCGCTACTTCCTTCACCAACACACTATACAGCTGAGACAACCTGCAACAGTCAAAGTTGCTGCAAACCTTGATTCTAGGCAGCCCCCTCCAAGTGAGATAAAATTGGAGTGCTCTGCTATTTTAATCATTTGGCTTTATTGTAATTCTTCTCATCGGCAGAATTTCTTAGAGACTGGTTTAATTATTGGTGGATGGGACAAGTATGAAGGTGGTCAAATCTTCGGTGTTCCTCTTGGTGGACCTATAGTTCAACAACCTTTTGCAATTGGAGGTTCTGGCTCCAGTTACTTGTATGGATTCTTTGACCAAGCATGGAAAGAAGGAATGACCAAAGATGAAGCTGAGGACTTAGTTAGAAAGGCGGTTTCACTTGCCATTGCACGTGATGGTGCTAGTGGGGGTGTTGTCCGAACAGTTACTATAAATTCAGAGGGAGTCACTAGGAAGTTTTGTCCTGGGGACCAACTTCCTCTGTGGCATGAGGAGCTGGAGGCGCAGAACTCGCTGCTGGACATCCTTGGCGCCACCGAGCCCATGAGCATGTGA 765 0.4706 MDHNADINAPHSMGTTIIGLTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRYFLHQHTIQLRQPATVKVAANLDSRQPPPSEIKLECSAILIIWLYCNSSHRQNFLETGLIIGGWDKYEGGQIFGVPLGGPIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVRKAVSLAIARDGASGGVVRTVTINSEGVTRKFCPGDQLPLWHEELEAQNSLLDILGATEPMSM 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0570 254 ProSiteProfiles Proteasome beta-type subunit profile. 14 214 IPR023333 -
Lele04g0570 254 PANTHER METALLOPROTEASE TLDD 8 229 IPR023333 -
Lele04g0570 254 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 10 237 IPR029055 -
Lele04g0570 254 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 15 235 IPR029055 -
Lele04g0570 254 ProSitePatterns Proteasome beta-type subunits signature. 18 65 IPR016050 GO:0005839|GO:0051603
Lele04g0570 254 CDD proteasome_beta_type_6 15 223 - -
Lele04g0570 254 Pfam Proteasome subunit 13 214 IPR001353 GO:0005839|GO:0051603
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0570 Lele-ChrLele04 3462806 3466056 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0570 04 3462806 3466056 Lele04g0570 04 3462806 3466056 ECH
Lele01g0560 01 3319708 3323088 Lele04g0570 04 3462806 3466056 hybridization
Lele02g0553 02 3329045 3332442 Lele04g0570 04 3462806 3466056 hybridization