Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0553 ATGTCAAAGCACCTGAACAACTACTCTACCGGATCGATTTCCGCGGCGGTGTCAGGTCAAAGAGTATCGAAACATATCGCCTCACTTCGGATCACTATGGATCATAACGCCGATATCAACGTCCCTCATTCCATGGGAACCACCATTATCGGCGTCACTTACAATGGCGGCGTGGTTCTCGGAGCTGACTCTCGAACCAGCACCGGAGTGTATGTTGCAAACCGGGCATCAGACAAAATTACGCAGCTGACTGATAATGTCTATGTTTGTCGCTCTGGATCGGCTGCTGATTCTCAGATTGTATCTGATTATGTGCGCCACTTCCTTCACCAACACACTATACAGCTGGGACAACCTGCAACAGTCAAAGTTGCTGCAAACCTTGTCAGACTTCTCTCCTATAACAACAAGAATTTCTTAGAGACTGGTTTAATTATTGGTGGATGGGACAAATATGAAGGTGGTCAAATCTTCGGCGTTCCTCTTGGTGGAACTATAGTTCAACAACCTTTTGCAATTGGAGGTTCTGGCTCCAGTTACCTGTATGGATTCTTTGACCAAGCATGGAAAGAAGGAATGACCAAAGATGAAGCTGAGGACTTAGTTAGAAAGGCGGTTTCACTTGCCATTGCACGTGATGGTGCTAGTGGGGGTGTTGTCCGAACAGTTACTATAAATTCAGATGGAGTCACTAGGAAGTTTTATCCTGGGGACCAACTTCCTCTGTGGCATGAGGAGCTGGAGGCGCAGAACTCACTGCTGGACATCCTTGATGCCCCTGCGCCCATGAGCATGTGA 798 0.4749 MSKHLNNYSTGSISAAVSGQRVSKHIASLRITMDHNADINVPHSMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYVCRSGSAADSQIVSDYVRHFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLETGLIIGGWDKYEGGQIFGVPLGGTIVQQPFAIGGSGSSYLYGFFDQAWKEGMTKDEAEDLVRKAVSLAIARDGASGGVVRTVTINSDGVTRKFYPGDQLPLWHEELEAQNSLLDILDAPAPMSM 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0553 265 FunFam Proteasome subunit beta 47 246 - -
Lele02g0553 265 ProSitePatterns Proteasome beta-type subunits signature. 50 97 IPR016050 GO:0005839|GO:0051603
Lele02g0553 265 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 47 246 IPR029055 -
Lele02g0553 265 PRINTS Proteasome component signature 54 69 IPR000243 GO:0004298|GO:0005839|GO:0051603
Lele02g0553 265 PRINTS Proteasome component signature 211 222 IPR000243 GO:0004298|GO:0005839|GO:0051603
Lele02g0553 265 PRINTS Proteasome component signature 186 197 IPR000243 GO:0004298|GO:0005839|GO:0051603
Lele02g0553 265 PRINTS Proteasome component signature 175 186 IPR000243 GO:0004298|GO:0005839|GO:0051603
Lele02g0553 265 CDD proteasome_beta_type_6 47 234 - -
Lele02g0553 265 PANTHER METALLOPROTEASE TLDD 38 241 IPR023333 -
Lele02g0553 265 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 33 244 IPR029055 -
Lele02g0553 265 Pfam Proteasome subunit 45 225 IPR001353 GO:0005839|GO:0051603
Lele02g0553 265 ProSiteProfiles Proteasome beta-type subunit profile. 46 225 IPR023333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0553 Lele-ChrLele02 3329045 3332442 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0553 02 3329045 3332442 Lele02g0553 02 3329045 3332442 ECH
Lele02g0553 02 3329045 3332442 Lele03g0563 03 3350493 3353614 hybridization
Lele02g0553 02 3329045 3332442 Lele04g0570 04 3462806 3466056 hybridization