Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0553 ATGGGTTGTGCGCAATCGAAAATAGACAATGAAGAATCGGTGGCTCGCTGTAAGGAACGCAAGACCTTGATGAAAGATGCGGTGGTTGCTCGGAATGCCTTCGCCGCCGGCCATTCCGGGTACGTTATGTCTCTGAAGAACACTGGAGCTGCACTGAGCGACTACGGCCACGGCGAAAGCTCTGTCACTCAAGAACTCCACCAGCCGCCATTGGACACTGCTTCAGAGCCGCCGCCTCCTCCTCCACCGCTCATGGACGACAACGTCCTGCCACCTCCGCCCCCGCTCCCAAATTTCTCTCCGAGCCCGCTTACGCGCGCTGCGACGATGCCGGCAATCACTATGCAACATCAAAAACCCTCCCGCGCGATGGATTCCGACCCCATTGCTGAAGAAGATGATGACGAAGAAGAAAATATTAAAATGAGTAAAGGTAATGGAGGAAAGTCGTTGAAAAAGAGAGGATCTGAAGCAGCATCGTCTTCTCCGCCTCGGACTCTAGATACGAAGTCAGTACCGCCCATGCCTGAATCGAAGGGTATGGCTTGGGATTACTTTTTTATGGTGGATAACATGTCAGGACCATCCTTGGGTGGGGAAGATGAGATTGGAAATGAGAACGAGGAGAGTGAAGCAATGGGTTATCATGAAGCTGAGAATCTGGGTGGCGGCGGAAGCCATATCAATATAAATGAAGTTGAACCCAAGACGCCGGAGAAGGCAGAGTTAAATGTGCAGGAGGAGATAGTGGAGTCTGTGAAGGAGGCAAAGCATATTGAGCACTCGAAGACTGCTCCCCCAGATTTCAGGAGAGCAATGAAGGTGGTTCCAAGTGTTAATCTGATGCAGATTCTTACTGAGCTCGACGATCACTTCTTGAAGGCCTCGGAGAGTGCACAAGAGGTCGCCAAGATGCTTGAGGCCACTAGATTGCATTACCATTCAAATTTCGCAGATAATCGGGGACATATTGATCATTCTGCTAGAGTTATGCGCGTCATAACATGGAATAGATCATTCAGAGGTGTGTCTAATGGCGATGGAGCAAAGGATGATTTTGATTCAGAAGATTATGAAACTCATGCCAGTGTCTTGGACAAGCTCTTAGCCTGGGAAAAAAAGCTGTATGAAGAGGTCAAGCAAGCTGAGCTGATGAAGTTTGAATATCAGAGAAAAGTTACATTACTGAACAAACAGAAGAAACGTAAAGCCAGTGCCGAATCTTTGGAAAAAACCAAAGCAGCTGTGAGCCATCTACATACAAGATATATTGTTGACATGCAATCAATGGATTCAACAGTTTCGGAAGTGAATCATATTCGTGATGCGCAGTTATATCCAAAACTTGTTGCTCTTGTTAATGGGATGGCCAATATGTGGGAAAGTATGTGCATACATCATGACAGCCAGCTGAAAATAGTTACAGATCTCAAATCTTTAGATATATCCCAAGCTCCTAAGGAAACAACCAAGCATCATTATGAGCGGACCGTCCAACTTGCTAATGTTGTCCAAGAATGGCACTTGCAATTTGAGAAATTCGTGACTCACCAGAAAAAGTACATCCAAGCTCTTAGTAGTTGGCTAAAGTTAAACCTCATTCCCATCGAAAGCAGCCTAAAGGAGAAAATCTCGTCGCCGCCAAAAGCCCAGAATCCACCTATTCAAGCCCTCCTTCAAGCTTGGCATGATTATGTTGATAGGCTTCCAGATGAGCTCGCGAAATCGGCTATTTCCTCCTTTGCTGCCGTGATAAAGACCATCATACTTCAGCAGGAGGAAGAGATGAAGCTAAAGGAGAAATGTGAGGAAACCAGAAAGGAATACTTGAGGAAAAACCAAGCATTTGAGGAATGGTACCAGAAGTATTTGCTGCGGAGGGGTCATGACGAAACAGATCAAGAAAGAGGAGATGAAGTAAATGCAAACAATCCTGTATCAGAGAAGCAGTTTGCTGTCGAGAGCTTGAAGAAGAGATTAGAAGAGGAAATCGAATCTCACCAAAAACACTGCGTTCAGGTTCGAGAGAAGTCACTGCAGAGTCTCAAGACTCGTTTGCCCGAACTTTTCCGAGCAATGTCGGACTATTCTCATGCCTGCACCGACGCTTATGAGAAACTGAAGTCTATTGCACATTCACAGGGCGCTGCTCCAATACCCTGA 2163 0.4637 MGCAQSKIDNEESVARCKERKTLMKDAVVARNAFAAGHSGYVMSLKNTGAALSDYGHGESSVTQELHQPPLDTASEPPPPPPPLMDDNVLPPPPPLPNFSPSPLTRAATMPAITMQHQKPSRAMDSDPIAEEDDDEEENIKMSKGNGGKSLKKRGSEAASSSPPRTLDTKSVPPMPESKGMAWDYFFMVDNMSGPSLGGEDEIGNENEESEAMGYHEAENLGGGGSHININEVEPKTPEKAELNVQEEIVESVKEAKHIEHSKTAPPDFRRAMKVVPSVNLMQILTELDDHFLKASESAQEVAKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGDGAKDDFDSEDYETHASVLDKLLAWEKKLYEEVKQAELMKFEYQRKVTLLNKQKKRKASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVNGMANMWESMCIHHDSQLKIVTDLKSLDISQAPKETTKHHYERTVQLANVVQEWHLQFEKFVTHQKKYIQALSSWLKLNLIPIESSLKEKISSPPKAQNPPIQALLQAWHDYVDRLPDELAKSAISSFAAVIKTIILQQEEEMKLKEKCEETRKEYLRKNQAFEEWYQKYLLRRGHDETDQERGDEVNANNPVSEKQFAVESLKKRLEEEIESHQKHCVQVREKSLQSLKTRLPELFRAMSDYSHACTDAYEKLKSIAHSQGAAPIP 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0553 720 Coils Coil 657 677 - -
Lele04g0553 720 SUPERFAMILY Formin homology 2 domain (FH2 domain) 78 185 - -
Lele04g0553 720 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lele04g0553 720 MobiDBLite consensus disorder prediction 72 101 - -
Lele04g0553 720 MobiDBLite consensus disorder prediction 102 121 - -
Lele04g0553 720 PANTHER UNCHARACTERIZED 1 712 - -
Lele04g0553 720 MobiDBLite consensus disorder prediction 55 176 - -
Lele04g0553 720 Coils Coil 588 608 - -
Lele04g0553 720 Pfam Protein of unknown function (DUF632) 281 586 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0553 Lele-ChrLele04 3366016 3369207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0553 276 608 Acyl Lipid Metabolism Gene Families AT2G27090 26.649 4.51e-36 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0553 04 3366016 3369207 Lele04g0553 04 3366016 3369207 ECH
Lele01g0539 01 3230526 3233697 Lele04g0553 04 3366016 3369207 hybridization
Lele02g0534 02 3234031 3237217 Lele04g0553 04 3366016 3369207 hybridization