Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0534 ATGGGTTGTGCACAATCGAAAATAGACAATGAAGAATCGGTGGCTCGCTGTAAGGAACGCAAGACCTTGATGAAAGATGCGGTGGTTGCTCGGAATGCCTTCGCCGCCGGCCATTCCGGGTACGTTATGTCTCTGAAGAACACAGGAGCTGCATTGAGCGACTACAGCCACGGCGAAAGCTCTGTCACTCAAGAACTCCACCAGCCGCCATTGGACACTGCTTCAGAGCCGCCGCCTCCACCTCCACCGCTCATGGAAGACAACCTCCTGCCACCTCCGCCCCCGCTCCCAAATTTCTCTCCGAGCCCGCTTACGCGCGCGGCGACGATGCCGGCAATCACTATGCAACATCAAAAACCCTCCCGCGCGATGGATTCCGACACCTTTGCTGAAGAAGATGAAGACGAAGAAGAAAATATTAAAATGAGTAAAGGTAGTGGAGGAAAGTCGTTGAAAAAGAGAGGATCTGAAGCAGCATCGTCTTCTCCGCCTCGGACTCTAGATACGAAGTCAGTACCACCCATGCCTGAATCGAAGGGTATGGCTTGGGATTACTTTTTTATGGTGGATAACATGTCAGGACCATCCTTGGGTGGGGAAGATGAGATTGGACAAGAGAACGAGGAGAGTGAAGCAATGGGTTATCATGAAGCTGAGGGCGGCGGAAGCCATATAAATATAAATGAAGTTGAACCCAAGACGCCGGAGAAGATAGAGTTAAATGTGCAGGAGGAGATAGTGGAATCTGTGAAGGAGGCAAAGCATATTGAGCACTCGAAGACTGCTCCCCCAGATTTCAGGAGAGCAATGAAGATGGTTCCAAGTGTTAATCTGATGCAGATTCTTACTGAGCTCGACGATCACTTCTTGAAGGCCTCGGAGAGTGCACAAGAGGTCGCCAAGATGCTTGAGGCCACTAGATTGCATTACCATTCAAATTTCGCAGATAATCGGGGCCATATTGATCATTCTGCCAGAGTTATGCGCGTGATAACATGGAATAGATCATTCAGAGGTGTGTCTAATGGCGATGGAGTAAAGGATGATTTTGATTCAGAAGATTATGAAACTCATGCCACTGTCTTGGACAAGCTCTTAGCCTGGGAAAAAAAGCTGTATGAAGAGGTCAAGCAAGCCGAGCTGATGAAGTTTGAATATCAGAGAAAAGTTACATTACTGAACAAACAGAAAAAACGTAAAGCCAGTGCCGAATCTTTGGAAAAAACCAAAGCAGCTGTGAGCCATCTACATACAAGATATATTGTTGACATGCAATCAATGGATTCAACAGTTTCAGAAGTGAATCATATTCGTGATGCGCAGTTATATCCAAAACTTGTCGCTCTTGTTAATGGGATGGCCAATATGTGGGAAAGTATGTGCATACATCATGACAGCCAGCTGAAAATAGTTACAGATCTCAAAGCTTTAGATATATCCCAAGCTCCTAAGGAAACAACCAAGCATCATTATGAGCGGACCGTCCAACTTGCTAATGTTGTCCAAGAATGGCACTTACAATTTGAGAAATTTGTGACTCACCAGAAAAAGTACATCCAGGCTCTTAGTAGTTGGCTAAAGTTAAACCTCATTCCCATCGAAAGCAGCCTAAAGGAGAAAATCTCGTCACCGCCAAAAGCCCAGAATCCACCTATTCAAGCCCTCCTTCAAGCTTGGCATGATTATGTTGATAGGCTGCCAGATGAGCTCGTGAAATCGGCTATTTCCTCCTTTGCTGCCGTGATAAAGACCATCATACTTCAGCAGGAGGAAGAGATGAAGCTAAAGGAGAAATGTGAGGAAACCAGAAAGGAATACTTGAGGAAAAACCAAGCATTTGAGGAATGGTACCAGAAGTATTTGCTGCGGAGGGGTCATGACGAAACAGATCAAGAAAGAGGAGATGAAGTAAATGCAAGCAATCCTGTATCAGAGAAGCAGTTTGCTGTCGAGAGCTTGAAGAAGAGATTAGAAGAGGAAATCGAATCTCACCAAAAATACTGCGTTCAGGTTCGAGAGAAGTCACTGCAGAGTCTCAAGACTCGTTTGCCCGAACTTTTCCGAGCAATGTCGGACTATTCTCATGCCTGCACCGACGCTTATGAGAAACTGAAGTCTATTGCACATTCACAGGGCGCTGCTCCAAGACCCTGA 2154 0.4605 MGCAQSKIDNEESVARCKERKTLMKDAVVARNAFAAGHSGYVMSLKNTGAALSDYSHGESSVTQELHQPPLDTASEPPPPPPPLMEDNLLPPPPPLPNFSPSPLTRAATMPAITMQHQKPSRAMDSDTFAEEDEDEEENIKMSKGSGGKSLKKRGSEAASSSPPRTLDTKSVPPMPESKGMAWDYFFMVDNMSGPSLGGEDEIGQENEESEAMGYHEAEGGGSHININEVEPKTPEKIELNVQEEIVESVKEAKHIEHSKTAPPDFRRAMKMVPSVNLMQILTELDDHFLKASESAQEVAKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGDGVKDDFDSEDYETHATVLDKLLAWEKKLYEEVKQAELMKFEYQRKVTLLNKQKKRKASAESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVNGMANMWESMCIHHDSQLKIVTDLKALDISQAPKETTKHHYERTVQLANVVQEWHLQFEKFVTHQKKYIQALSSWLKLNLIPIESSLKEKISSPPKAQNPPIQALLQAWHDYVDRLPDELVKSAISSFAAVIKTIILQQEEEMKLKEKCEETRKEYLRKNQAFEEWYQKYLLRRGHDETDQERGDEVNASNPVSEKQFAVESLKKRLEEEIESHQKYCVQVREKSLQSLKTRLPELFRAMSDYSHACTDAYEKLKSIAHSQGAAPRP 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0534 717 MobiDBLite consensus disorder prediction 54 176 - -
Lele02g0534 717 Pfam Protein of unknown function (DUF632) 278 583 IPR006867 -
Lele02g0534 717 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lele02g0534 717 Coils Coil 585 605 - -
Lele02g0534 717 MobiDBLite consensus disorder prediction 72 101 - -
Lele02g0534 717 SUPERFAMILY Formin homology 2 domain (FH2 domain) 78 184 - -
Lele02g0534 717 Coils Coil 654 674 - -
Lele02g0534 717 MobiDBLite consensus disorder prediction 54 70 - -
Lele02g0534 717 PANTHER UNCHARACTERIZED 1 709 - -
Lele02g0534 717 MobiDBLite consensus disorder prediction 102 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0534 Lele-ChrLele02 3234031 3237217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0534 273 605 Acyl Lipid Metabolism Gene Families AT2G27090 26.913 4.21e-37 146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0534 02 3234031 3237217 Lele02g0534 02 3234031 3237217 ECH
Lele02g0534 02 3234031 3237217 Lele03g0548 03 3261497 3264675 hybridization
Lele02g0534 02 3234031 3237217 Lele04g0553 04 3366016 3369207 hybridization