Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0539 ATGGGCTGTGCACAATCGAAAATAGACAATGAAGAATCGGTGGCTCGCTGTAAGGAACGCAAGACCTTGATGAAAGATGCGGTGGTTGCTCGGAATGCCTTCGCCGCCGGCCATTCCGGGTACGCTATGTCTCTGAAGAACACTGGAGCTGCACTGAGCGACTACGGCCACGGCGAAAGCTACGTCACTCCAGAACTCCACCAGCCACCATTGGACCCCGCTTCAGAGCCGCCGCCTCCCCCTCCACCGCTCATGGAAGACAGCCTCCCGCCCCCTCCGCCCCCTCTCCCAAATTTCCCTCCAAGCCCGCTTAAGCGCGCTGCGACGATGCCGGCAATTACTATGCAACATCAAAAACCCTCCCGCGCGATGGATTCCGACACCATTGCTGAGGAAGACGAGGACGAAGAAGAAAATATTAAAATGAGTAAAGGTAATGGAGGAAAGTCGTTAAAAAAGGGAGGATCTGAGGCAGCGTCGTCTTCTCCGCCTCGGACTCCAGATACGAAGCCAGTCCCGCCCATGCCTGAATCGAAGGGTATGGCTTGGGATTACTTTTTTATGGTGGATAATATGCCAGGACCATCTTTGGGTGGGGAAGATGAGATTGAAAATGAGAACGAGGAGAGTGAAGCAATGGGCTATCATGAAGCTGAGAATGTGGGTGGTGGCGGAAGCCATATCAGCTTGAATGAAGTTGAACCCAAGACGCCGGAGAAGGTAGAGGTGAATGTGCAGGAGGAAATAGTGGAGTCTGTGAGGGAGGCAAAGCATATTGAGCACTCGAAGACTGCTCCACCGGATTTCAGGAGAGCAGTGAAGGTGGTTCCAACTGTTAATCTGATGCAGATTCTTACTGAGCTTGACGATCACTTCTTGAAGGCCTCAGAGAGTGCACAAGAGGTCGCCAAGATGCTTGAGACCACTAGATTGCATTACCATTCAAATTTCGCAGATAATCGCGGGCATATTGATCATTCTGCTAGAGTTATGCGCGTGATAACATGGAATAGATCGTTCAGAGGTGTGTCTAATGGCAATGGAGCAAAGGATGATTTTGATTCAGAAGATTATGAAACTCATGCCACTGTCTTGGACAAGCTGTTAGCCTGGGAAAAAAAGCTGTATGAAGAGGTGAAGCAAGCTGAGCTGATGAAGTTTGAATATCAGAGAAAAGTTACATTACTGAACAAACAGAAGAAACGTAAAGCGAGTGCCGAAGCTTTGGAAAAAACCAAAGCAGCTGTGAGCCATCTTCATACAAGATATATTGTTGACATGCAGTCAATGGATTCAACGGTTTCAGAAGTGAATCATATTCGTGATGCACAGTTATATCCAAAACTCGTTGCTCTTGTGAATGGGATGGCGAATATGTGGGAAAATATGAGCATACACCATGACAGCCAGCTGAAAATAGTAATAGATCTCAAAGCTTTAGATATATCTCAAGCTCCTAAGGAAACAACCAAGCATCATTATGAGCGGACCGTCCAACTTGCTAATGTTGTCCAAGAATGGCACTTACAATTTGAGAAATTTGTGACTCACCAGAAACAGTACATCCAAGCTCTTAGTAGCTGGCTAAAGTTAAACCTCATTCCCATCGAAAGCAGCCTAAAGGAGAAAATCTCATCCCCACCGAAAGCCCAGAATCCACCTATTCAATCCCTTCTTCAAGCTTGGCATGATTATGTTGATAGGCTTCCAGATGAGCTCGCGAGAACGGCTATTCAATCCTTTGCTGCTGTGATAAAGACTATCATACTTCAACAGGAGGAAGAGATGAAGCTAAAGGAGAAATGTGAGGAAACCAGAAAGGAATACTTGAGGAAAAACCAAGCATTTGAGGAATGGTACCAGAAGTATTTACTGAGGAGGGGTCATGATGAAACAGATCATGAAAGAGATGAAGTAACTGCAAACAATCCTGTATCAGAGAAGCAGTTTGCTGTCGAGAGCTTGAAGAAGAGATTAGAAGAGGAAATCGAATCTCACCAAAAACACTGCGTTCAGGTTCGAGAGAAGTCACTACAGAGTCTCAAGACTCGTTTGCCTGAACTTTTCCGAGCAATGTCAGACTATTCTTATGCCTGCGCCGACGCTTATGAGAAACTGAAGTCTATTGCAAATTCACATGGGGCTGCTCCGAGACCTTGA 2160 0.4639 MGCAQSKIDNEESVARCKERKTLMKDAVVARNAFAAGHSGYAMSLKNTGAALSDYGHGESYVTPELHQPPLDPASEPPPPPPPLMEDSLPPPPPPLPNFPPSPLKRAATMPAITMQHQKPSRAMDSDTIAEEDEDEEENIKMSKGNGGKSLKKGGSEAASSSPPRTPDTKPVPPMPESKGMAWDYFFMVDNMPGPSLGGEDEIENENEESEAMGYHEAENVGGGGSHISLNEVEPKTPEKVEVNVQEEIVESVREAKHIEHSKTAPPDFRRAVKVVPTVNLMQILTELDDHFLKASESAQEVAKMLETTRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGNGAKDDFDSEDYETHATVLDKLLAWEKKLYEEVKQAELMKFEYQRKVTLLNKQKKRKASAEALEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVNGMANMWENMSIHHDSQLKIVIDLKALDISQAPKETTKHHYERTVQLANVVQEWHLQFEKFVTHQKQYIQALSSWLKLNLIPIESSLKEKISSPPKAQNPPIQSLLQAWHDYVDRLPDELARTAIQSFAAVIKTIILQQEEEMKLKEKCEETRKEYLRKNQAFEEWYQKYLLRRGHDETDHERDEVTANNPVSEKQFAVESLKKRLEEEIESHQKHCVQVREKSLQSLKTRLPELFRAMSDYSYACADAYEKLKSIANSHGAAPRP 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0539 719 SUPERFAMILY Formin homology 2 domain (FH2 domain) 78 83 - -
Lele01g0539 719 MobiDBLite consensus disorder prediction 52 178 - -
Lele01g0539 719 Pfam Protein of unknown function (DUF632) 281 586 IPR006867 -
Lele01g0539 719 MobiDBLite consensus disorder prediction 70 104 - -
Lele01g0539 719 Coils Coil 656 676 - -
Lele01g0539 719 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lele01g0539 719 PANTHER UNCHARACTERIZED 1 710 - -
Lele01g0539 719 Coils Coil 588 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0539 Lele-ChrLele01 3230526 3233697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0539 1 95 Acyl Lipid Metabolism Gene Families AT2G27090 35.714 1.10e-08 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0539 01 3230526 3233697 Lele01g0539 01 3230526 3233697 ECH
Lele01g0539 01 3230526 3233697 Lele03g0548 03 3261497 3264675 hybridization
Lele01g0539 01 3230526 3233697 Lele04g0553 04 3366016 3369207 hybridization