Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0486 ATGGCCGCATTGCCCACAGACCGAGCACTCTCTCTTCTAGCCGCTGCCAACAATCATGGCGACTTAGCTGTCAAAATTTCGTCTTTGAAACAAGCCAAGGATATTCTTTTGTCAATGGAGCCGGCTTTAGCCGCCGACCTTTTCTCCTACTTGGTCGAGCTTCAGTCCTCCCCCGAAACCCTCGTTCGTAAATTATTGATCGAGGTAATTGAAGAGATAAGTTTAAGAGCATCAGAGCATTCTCCAAAACTAATGTCTGTATTATTAGCATTTTTACGAGATTGTGACACAATTGTCGTAAAGCAGTCTATTATTAGTGGCACATATATCTTCTGCAGTGTTTTGGCTGAGATGACGGTGCAGTATCAACAATTTGGTAAAGTTGAGAGGTGGCTGGAGGAGATTTGGATGTGGATGCTTAAGTTCAAGGATGTTGTATTTGGGATTGCTCTGGAGCCTGGTTCAGTTGGAACGAAGTTGTTAGCGCTGAAATTCTTGGAAACACTAGTCTTACTTTTTTCGTCTGACATCAGTTATCCTGAGAAGTCACTTTTAGAAGGAGGCAGAAAAGTATTTAATATCTCATGGTTGGAGGGTAGTCACCCTGTTCTTGATCCGGTGATGCTCATGTCAGAAGCAAGTAGGACTGTGGGCATTCTATTAAACTTATTGCAATCGGCTGATAGTCTGCCTGGTTGCTTGACAATTGCTGTTGTCAATTGTCTTGCAGCCATAGCAAGGAAAAGGCCACAGCACTGCAACACTGTTCTTCCAGCATTGCTCGATTTTGATCCAAATTTTCAAACAGTAAAAGGATGTCATACTGCCAGTATTCAGTACTCCTTAAGAACAGCATTTTTGGGGTTTCTAAGGTGCACTCACTTACCAATATTAGAGTCAAGAGAAAGATTGGTAAAGAGCCTGCAAGCTATGAATGCAGGGGATGCTGCAGAGCAAGTCATTCGGCAAGTTGACAAATTAATTAGAAATGGTGATCGCTCTATTCGTGATGTTCGAACTAGCAAGGATGATTACCTATCAACTCAGGCTCCGGTTTCTGGGGAATTATCTAGAAAAAGACCAATGCCTGTGGATAAAGGACAACTGACCAATGGTCATGAGGTCATCTCTAAGAGAATTCATTCTGGCCCTGGCCCACGCTCTCCTTTATCTGTTCAAATAATTGATTCTGATCAGGATGTTAATTCTGCAAGTGAACTATCCTCTAATGTTCCTGTGCTGGATAGTGAACTAACTGCTGTGGAGCAAATGATTGCTATGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTATTTCAAAGATCCATCCTGATTTGTTAGCGGATATTGTCATTACTAACATGAGGCACTTGCCTAAGACACCACCATCATTAACAAGGCTTGGGGATCTACCAGTAACACAAGCTGATGCCCAACGCAGTCAATTGCAAGCTGTAGCATCTGCACCCATAAATTCTGTTCAATTGTCTGCTATTACAGCTCAAACTACATTCCCTTCAGCTACATCCACGACCACTGTCACATCACTATCTGACACCTCTAATGTCAATAATCTGCCTGCTGATTCCAAACGTGATCCACGCAGGGATCCTCGTCGCCTGGATCCTAGGCGTGTGGCGGTAAATGCTGCAGGGACAGTCATATCTGTTATGGAAGATACTGAATCTGTGAAATCGGAGTTGGATGAATCTTTATCTTTGAGTAAGCCTGTTTCACATTCCGTTGTGACCCCTATTGACAATGCTCCAGCACCTCTAACAGCCAATATCAGAGGTGAAGATATCATCTCTGAAGGTCCACCAGTTTCAGTACCTGAAAAACCAATTACCAAGATGGAGATTCAAGAGAAGCTCAGAGATATTGACCAGAGTCCAGAAGAAAATGCATTTTTAGATCCCCCGCACTCTGTTGCTGATGTTATAGATGAGGATCTGAGTACAGTGAATCTATTAGATACCGAGGCAAAAGAGACCAGTTCAACTATACCGGAATATGATCAGTTTTCTTCAGATGCTACATCTGCATCTACATCAGAAGATACCTGTCTGGAATTACCACGGCTTCCACCATACGTTGAACTGTCCAAAGATCATAAAAGTAACATTAAACATATGGCAATTAAGCATCTTATTGAGTCATACAAGCATTTGCATGAGACAGATTGTCAGCAGTTTTGCATGCCATTACTTGCCCGAATGGTAGCTCAGATCGATGATGATGAAGAGTTTAGTTTGATGCTGCAAAAACATGTCCTGGATGACCAGTGGCGAAAGGGCCATGAACTTGTATTGCATGTTTTGTACCATCTGCACTCCTGCGTTATGCTAGATTCAATTCCAAACTCTTCATCTGCTGCTGTTCTGTATGAAAATTTTCTCTTGGGAGTGGCCAAATCTGTGTTGGAGGCTTTCCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTAGGTGAAGTCCCGCTTTTGCCTGAATCTGCATTGAAAGTTTTGAATGATCTCTGCTATTCTAGTGTTATTGATCATCATGGTAAGGTTGTCCGTGACATTGAGCGTGTAACTCAAGGCCTTGGTGCGATATGGAGTTTGATATTGGGGCGTCCACAATATCGGCAGGCATGCTTGGATATAGCATTGAAGTGTGCGGTTCACCCCCAGGATGAGATTAGAGCAAAAGCTATTCGGCTGGTGGCAAACAAGCTCTATCAGCTGAGCTACATATCAGAAGATGTTGAACAGTTTGCTAAACAGATGCTTCTGTCTGCTGTAGACCAAAAAGTCTTAGATACAGGTCTTTCTGATTCTGGACCCATTGAACAAGGAGCTGACACAGAGATTGGAATTCACGAAACACCAGGTCCACTGCAAGATTCAGTATCCACCACGTCTGAAAATGACCCCTCAAAAATTGCTAAACCAGTGGTTCCAAATGTTGCATCTGTGTCATTCTCTGAAGCTCAACGTCTCATATCATTGTTTTTTGCTTTATGCACAAAGAAACACAGCCTTCTTCAGACTATCTTTGAGGCCTATGGGCGATCGCCAAAAGCTGTAAAGCAGGCCATTCATCGTCACATTCCTATTCTTTTGAGGGCCTTAGGGCAATCATATTCTAAAGTTCTCCATATTATATCCGATCCACCACAAGGAAGTGAAAATCTTCTGACACTGGTGTTGCAAATATTGACTCAAGAAACGGCAGCATCTGCTGATCTGATAGCTACTGTTAAGCATTTATACGAAACTAAATTAATGGATGTTTCAATTCTTGTTCCCTTGCTTCCATCGCTGTCCAAGAATGAGGTTTTACCAATATTCCCTCGGCTTCTTGATCTTCCTTTGGAAAAGTTCCAAATGGCACTTGCTCATGTACTACAGGGTTCTGCTCATACAGGTCCAGCTTTGACACCTGTAGAAGTGTTGGTTGCCATCCATGGAATTGTTCCTGAGAAAGATGGCATTGCTCTTAAGAAGATAACTGATGCTTGCACCGCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTGGCAAAAGCATTAAACCAGATGGTCGATCAAACTCCATTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAGTTGATGCTTTTCCAGTACTGGTTGATTTTGTTATGGAGATATTATCAAAACTTGTTAGCAAACAGGTGTGGCGGATGCCAAAACTTTGGGTTGGTTTCCTAAAATGTGTATATCAGACTCAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCTCCACAACTGGAAAGTGCTCTCAACAAACATGCAAATCTCAGAGGTCCTCTTGCTTCTTACGCCAGTCAACCCACCGTTAAATCTTCGCTACCTAGGTCAACATTAGTTGTGCTTGGTCTTGCAAATGAAACTCAAATGCAGCAACATCCATTGCACTCTTCTGACCCGAGTTCTTCTGTTAACGGAGCAACTCTGACATGA 4002 0.4268 MAALPTDRALSLLAAANNHGDLAVKISSLKQAKDILLSMEPALAADLFSYLVELQSSPETLVRKLLIEVIEEISLRASEHSPKLMSVLLAFLRDCDTIVVKQSIISGTYIFCSVLAEMTVQYQQFGKVERWLEEIWMWMLKFKDVVFGIALEPGSVGTKLLALKFLETLVLLFSSDISYPEKSLLEGGRKVFNISWLEGSHPVLDPVMLMSEASRTVGILLNLLQSADSLPGCLTIAVVNCLAAIARKRPQHCNTVLPALLDFDPNFQTVKGCHTASIQYSLRTAFLGFLRCTHLPILESRERLVKSLQAMNAGDAAEQVIRQVDKLIRNGDRSIRDVRTSKDDYLSTQAPVSGELSRKRPMPVDKGQLTNGHEVISKRIHSGPGPRSPLSVQIIDSDQDVNSASELSSNVPVLDSELTAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHLPKTPPSLTRLGDLPVTQADAQRSQLQAVASAPINSVQLSAITAQTTFPSATSTTTVTSLSDTSNVNNLPADSKRDPRRDPRRLDPRRVAVNAAGTVISVMEDTESVKSELDESLSLSKPVSHSVVTPIDNAPAPLTANIRGEDIISEGPPVSVPEKPITKMEIQEKLRDIDQSPEENAFLDPPHSVADVIDEDLSTVNLLDTEAKETSSTIPEYDQFSSDATSASTSEDTCLELPRLPPYVELSKDHKSNIKHMAIKHLIESYKHLHETDCQQFCMPLLARMVAQIDDDEEFSLMLQKHVLDDQWRKGHELVLHVLYHLHSCVMLDSIPNSSSAAVLYENFLLGVAKSVLEAFPASDKSFSRLLGEVPLLPESALKVLNDLCYSSVIDHHGKVVRDIERVTQGLGAIWSLILGRPQYRQACLDIALKCAVHPQDEIRAKAIRLVANKLYQLSYISEDVEQFAKQMLLSAVDQKVLDTGLSDSGPIEQGADTEIGIHETPGPLQDSVSTTSENDPSKIAKPVVPNVASVSFSEAQRLISLFFALCTKKHSLLQTIFEAYGRSPKAVKQAIHRHIPILLRALGQSYSKVLHIISDPPQGSENLLTLVLQILTQETAASADLIATVKHLYETKLMDVSILVPLLPSLSKNEVLPIFPRLLDLPLEKFQMALAHVLQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKITDACTACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPVLVDFVMEILSKLVSKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHANLRGPLASYASQPTVKSSLPRSTLVVLGLANETQMQQHPLHSSDPSSSVNGATLT 1333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0486 1333 Pfam Symplekin/PTA1 N-terminal 96 318 IPR032460 -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 1313 1333 - -
Lele04g0486 1333 Pfam Symplekin tight junction protein C terminal 1098 1276 IPR022075 -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 946 980 - -
Lele04g0486 1333 SUPERFAMILY ARM repeat 17 1274 IPR016024 -
Lele04g0486 1333 Gene3D - 2 338 IPR011989 -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 966 980 - -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 514 535 - -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 514 551 - -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 346 369 - -
Lele04g0486 1333 MobiDBLite consensus disorder prediction 536 551 - -
Lele04g0486 1333 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 2 1332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0486 Lele-ChrLele04 2916835 2939365 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0486 04 2916835 2939365 Lele04g0486 04 2916835 2939365 ECH
Lele01g0481 01 2836043 2854733 Lele04g0486 04 2916835 2939365 hybridization
Lele02g0466 02 2802605 2815689 Lele04g0486 04 2916835 2939365 hybridization