Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0466 ATGGTTCATCTGGTATGCAGTGCAAACCTACTGTTTGAAATCAAAGTTCATGACATGGACGTTGTGCTTGGAGTATCACAGATCACCATGAATGTGTCAGTAATTTATATGGATCCATATCTATATGTGGACCATTATAAATGGTTTGATATCCTGAAGAATGCAAGTGTGGTCCATGAGGCTTTTCTGTTGGAATTTGAGAATGTTTTTTTAGTTATCACTACTTCTATTTTGTATGTCATTCTGCAGTTTGTAGATGACACCGGATTGAGTGGCTTTGGTGATGTGTCAGTGCACTGGGGCTTGGCGGCTTCACCAGTTAGGTTTTCTTCCTTTGACAGGCTTGCAGCCATAGCAAGGAAAAGGCCACAGCACTGCAACACTGTTCTTCCAGCATTGCTCGATTTTGATCCAAATTTTCAAACGGTAAAAGGATGTCATACTGCCAGTATTCAGTACTCCTTAAGAACAGCATTGTTGGGGTTTCTAAGGTGCACTCACTTACCAATATTAGAGTCAAGAGAAAGATTGGTAAAGAGCCTGCGAGCTATGAATGCAGGGGATGCTGCGGAGCAAGTCATTCGGCAAGTTGACAAATTAATTAGAAATGGTGATCGCTCTATTCGTGATGTTCGAACTAGCAAGGATGATTACCTATCAACTCAGGCTCCAGTTTCTGGGGAATTATCTAGAAAAAGACTAATGCCTGTGGATAAAGAACAACTGACCAATGGTCATGAGGTCATCTCTAAGAGAATTCATTCTGGCCCTGGCCCTGGCCCACGCTCTCCTTTATCTGTTCAAATAATTGATTCTGAGCAGGATGTTAATTCTGCAAGTGAACTATCCTCTAATGTTCCTGTGCTGGATAGTGAACTAACTGCTGTTGAGCAAATGATTGCTATGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTATTTCAAAGATCCATCCTGATTTGTTAGCGGATATTGTCATTACTAACATGAGGCACTTGCCTAAGACACCACCATCATTAACAAGGCTTGGGGATCTACCAGTCACACAAGCTGATGCCCAACGCAGTCAATTGCAAGCTGTAGCATCTGCACCCATAAATTCTGTTCCATCGGCTGCTATTACAACTCAAACTACATTCCCTTCAGCTACAGTGATGACCACTGTCACATCACTATCTGACACCTCTAATGTCAATGATCTGCCTGCTGATTCCAAACGAGAACCACGCAGGGATCCTCGTCGCCTGGATCCCAGGCGTGTGGCGGTAAATGCTGCAGGGACAGCCATATCTGTTATGGAAGATACTGAATCTGTGAAATCGGAGTTGGATGTATCTTTGTCTTTGAGTAAGCCTGTTTCACATTCCGTTGTGACCCCTATTGACAATGCTCCAGCACCTCTAACAGCCAATATCAGGGGTGAAGATATCATCTCTGAAGGTCCACCAGTTTCAGTACCTGAAAAACCAATTACCAAGATGGAGATTCAAGAGAAGCTCAGAGATATTGACCGGAGTCCAGAAGAAAATGCATTTTTAGATCCCCCGCACTCTGTTGCTGATGTTATAGATGAGGATCTGAGTACAGTGAATCAATTAGATACCGAGGCAAAAGGGACCAGTTCAACTATACTGGAATATGATCAGTTTTCTTCAGATGCTGCATCTGCATCTACATCAGAAGATACCTGTCTGGAATTACCACAGCTTCCACCATATGTTGAACTGTCCAAAGATCATAAAAGTAACATTAAACATATGGCAATTAATCATCTTATTGAGTCATACAAGCATTTGCATGGGACAGATTGTCAGCAGTTTTGCATGCCATTACTTGCCCGAATGGTAGCTCAGATTGATGATGATGAAGAGTTTAGTTTGATGCTGCAAAAACATGTCCTGGATGACCAGTGGCGAAAGGGCCATGAACTTGTATTGCATGTTTTGTACCATCTGCACTCCTGCGTTATGCTAGATTCAATTCCAAACTCTTCAGCTGCTGCTGTTCTGTATGAAAATTTTCTCTTGGGGGTGGCTAAGTCTGTGTTGGAGGCTTTCCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTAGGTGAAGTCCCGCTTTTGCCTGAATCTGCATTGAAAGTTTTGAATGATCTCTGCTATTCTAGTGTTATTGATCATCATGGTGAAGTTGTCCGTGACATTGAGCGAGTAACTCAAGGCCTTGGTGCAATATGGAGTTTGATATTGGGGCGTCCACAATATCGGCAGGCGTGCTTGGATATAGCTTTGAAGTGTGCGGTTCACCCCCAGGATGAGATTAGAGCAAAAGCTATTCGGCTGGTGGCAAACAAGCTCTATCAGCTAAGCTACATATCAGAAGATGTTGAACAGTTTGCTAAACAGATGCTTCTGTCTGCTGTAGACCAAAAAGTCTTAGATACAGGTCTTTCTGATTCTGGATCCATTGAACAAGGAGCTGACACAGAGATTGGAATTCACGAAACACCAGGTCCACTGCAAGATTCAGTAGCCACCACATCTGAAAATGACCCCTCTAAAATTGCTAAACCAATGGTTCCAAATGTTGCATCTGTGTCATTCTCTGAAGCTCAACGTCTCATATCATTGTTTTTTGCTTTATGCACAAAGAAACCCAGCCTTCTTCAGACTATCTTTGAGGCCTATGGGCGATCCCCAAAAGCTGTAAAGCAGGCCATTCATCGCCACATTCCTATTCTTTTGAGGGCCTTAGGGCAATCATATTCTAAAGTTCTCCATATTATATCCGATCCACCACAAGGAAGTGAAAATCTTCTGACACTGGTGTTGCAAATATTGACTCAAGAAACGACAGCATCTGCTGATCTGATAGCTACTGTTAAGCATTTATACGAAACTAAATTAAGGGATGTTTCAATTCTTGTTCCCTTACTTCCATCGCTGTCCAAGAATGAGGTTTTACCAATATTCCCTCGGCTTCTTGATCTTCCTTTGGAAAAGTTCCAAATGGCACTTGCTCATGTACTACAGGGTTCTGCTCATACAGGTCCAGCTTTGACACCTGTAGAAGTGTTGGTTGCCATCCATGGAATTGTTCCTGAGAAAGATGGCATTGCTCTTAAGAAGATAACTGATGCTTGCACCGCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTGGCAAAAGCATTAAACCAGATGGTTGATCAAACTCCATTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAGTTGATGCTTTTCCAGTACTGGTTGATTTTGTTATGGAGATATTATCAAAACTTGTTAGCAAACAGGTGTGGCGGATGCCAAAACTTTGGGTTGGTTTCCTAAAATGTGTATATCAGACTCAGCCACGTTCTTTTCATGTATTATTGCAGTTGCCACCACCACAACTGGAAAGTGCTCTCAACAAACATGCAAATCTCAGAGGTCCTCTTGCTTCTTACGCCAGTCAACTCACTGTTAAATCTTCGCTACCTAGGTCAACATTAGTTGTGCTTGGTCTTGCAAATGAAACTCAAATGCAGCAACATCCATTGCCCTCTTCTGACACAAGTTCCTCTGTTCACGGAGCAACTCTGACATGA 3627 0.4257 MVHLVCSANLLFEIKVHDMDVVLGVSQITMNVSVIYMDPYLYVDHYKWFDILKNASVVHEAFLLEFENVFLVITTSILYVILQFVDDTGLSGFGDVSVHWGLAASPVRFSSFDRLAAIARKRPQHCNTVLPALLDFDPNFQTVKGCHTASIQYSLRTALLGFLRCTHLPILESRERLVKSLRAMNAGDAAEQVIRQVDKLIRNGDRSIRDVRTSKDDYLSTQAPVSGELSRKRLMPVDKEQLTNGHEVISKRIHSGPGPGPRSPLSVQIIDSEQDVNSASELSSNVPVLDSELTAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHLPKTPPSLTRLGDLPVTQADAQRSQLQAVASAPINSVPSAAITTQTTFPSATVMTTVTSLSDTSNVNDLPADSKREPRRDPRRLDPRRVAVNAAGTAISVMEDTESVKSELDVSLSLSKPVSHSVVTPIDNAPAPLTANIRGEDIISEGPPVSVPEKPITKMEIQEKLRDIDRSPEENAFLDPPHSVADVIDEDLSTVNQLDTEAKGTSSTILEYDQFSSDAASASTSEDTCLELPQLPPYVELSKDHKSNIKHMAINHLIESYKHLHGTDCQQFCMPLLARMVAQIDDDEEFSLMLQKHVLDDQWRKGHELVLHVLYHLHSCVMLDSIPNSSAAAVLYENFLLGVAKSVLEAFPASDKSFSRLLGEVPLLPESALKVLNDLCYSSVIDHHGEVVRDIERVTQGLGAIWSLILGRPQYRQACLDIALKCAVHPQDEIRAKAIRLVANKLYQLSYISEDVEQFAKQMLLSAVDQKVLDTGLSDSGSIEQGADTEIGIHETPGPLQDSVATTSENDPSKIAKPMVPNVASVSFSEAQRLISLFFALCTKKPSLLQTIFEAYGRSPKAVKQAIHRHIPILLRALGQSYSKVLHIISDPPQGSENLLTLVLQILTQETTASADLIATVKHLYETKLRDVSILVPLLPSLSKNEVLPIFPRLLDLPLEKFQMALAHVLQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKITDACTACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPVLVDFVMEILSKLVSKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHANLRGPLASYASQLTVKSSLPRSTLVVLGLANETQMQQHPLPSSDTSSSVHGATLT 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0466 1208 MobiDBLite consensus disorder prediction 408 423 - -
Lele02g0466 1208 Pfam Symplekin tight junction protein C terminal 973 1151 IPR022075 -
Lele02g0466 1208 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 114 1207 - -
Lele02g0466 1208 MobiDBLite consensus disorder prediction 1188 1208 - -
Lele02g0466 1208 Pfam Symplekin/PTA1 N-terminal 113 191 IPR032460 -
Lele02g0466 1208 MobiDBLite consensus disorder prediction 401 423 - -
Lele02g0466 1208 Gene3D - 101 211 IPR011989 -
Lele02g0466 1208 SUPERFAMILY ARM repeat 577 1150 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0466 Lele-ChrLele02 2802605 2815689 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0466 02 2802605 2815689 Lele02g0466 02 2802605 2815689 ECH
Lele02g0466 02 2802605 2815689 Lele03g0490 03 2854555 2867937 hybridization
Lele02g0466 02 2802605 2815689 Lele04g0486 04 2916835 2939365 hybridization