Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0481 ATGGCCACATTTCCCAGAGACCGAGTACTCTCTCTTCTGGCCGCTGCCAACAATCATGGCGACTTAGCTGTCAAGATTTCGTCTTTGAAACAAGCCAAGGATATTCTTTTGTCAATGGAGCCGTCTTTAGCCGCCGACATTTTCTCCTACTTGGTCGAGCTCCAGTCCTCCCCCGAAACCCTCGTTCGTAAATTATTGATCGAGGTAATTGAAGAGATAAGTTTAAGAGCAGCAGAGCATTCTCCAACACTAATGTCTGTATTATTAGCATTTTTACGAGACAGTGACGCAATAGTCGTAAAGCAGTCTATTGTTAGTGGCACGTATATCTTCTGCAGTGTTTTGGCTGAGATGACGGTGCAGTATCAACAATATGATAAAGTTGAGAGGTGGCTGGAGGAGATTTGGATGTGGATGCTCAAGTTCAAGGATGCTGTATTTGGGATTGCTCTGGAGCCTGGTTCAGTTGGAACGAAGTTGCTAGCACTGAAATTCTTGGAAACACTGGTCTTACTTTTTTCATCTGACATCATTTATCCTGAGAAGTCACCTTTAGAAGGAGGCAGTAAAGTATTTAATATCTCATGGTTGGAGGTTAGTCACCCTGTTCTTGATCCGGTGATGCTCATGTCAGAAGCAAGTAGGATTGTGGGCATTCTATTAAACTTATTGCAATCGGCTGGTAGTCTGCCTGGTTGCTTGACAATTGCTGTTGTTAATTGTCTTGCAGCCATAGCAAGGAAAAGGCCACAGCACTGCAATACTGTTCTTCCCGCATTGCTTGATTTTGATCCAAATTTTCAAACAGTAAAAGTATGTCATACTGCCAGTATTCAGTACTCCTTAAAAACAGCATTTTTGGGGTTTCTAAGGTGCACTCACTCACCAATATTAGAGTCAAGAGAAAGATTGGTAAAGAGCCTGCGAGCTATGAATGTAGGGGATGCTGCTGAGCAAGTCATTCGGCAAGTTGACAAATTAATTAGAAATGGGGATCGCTCGACTTGTGATGTTCGAACTAGCAAGGACGATTACCTATCAACGCAGACACCAATTTCTGGGGAATTATCTAGAAAAAGACCAATGCCTGTGGATAAAGAACAACTGACCAATGGTCATGAGGTCATCTCTAAGCGAATTCATTCTGGCCCTGGCCCATGCTCTCCTTTATCTGTTCAAATAATTGATTCTGAGCAGGATGTTAACGCTACAAGTGAACTATCCTCTAATGTTCCTGTGCCGGATAGTGAACTATCTGCTGTGGAGCAAATGATTGCTATGATTGGTGCTTTGCTTGCTGAAGGAGAAAGAGGTGCTGAATCTCTTGAAATCCTTATTTCAAAGATCCATCCTGATTTGTTAGCTGATATTGTCATTACTAACATGAGGCACTGGCCTAAGACACCACCATCGTTAACAAGGCTCGGAGATCTACCAGTAACACAAGCTGATACCCAACGCAGTCATTTGCGAGCTGTAGCATCTGCACCCATACATTCTGTTCAATCTACTGCTATTACAGTTCAAGCTCCATTCCCTTCAGCTACAGCCACAGCCACTGTTACATCACTATCTGATGCCTCTAATGTCAATAATCTGCCTGCTGATTCCAAACGTGATCCACGCAGGGATCCTCGTCGCCTGGATCCTAGGCGTGTGGCAGTAAATGCTGCAGGGACAGCCATATCTTCTATGGAAGACACTAGTTCTGTGAAATCAGAGTTTGATGAATCTTTATCTTTGAGTAAGCCTGTTTCACATTCCGTTGTGACCAATATTGACAATGCTCCAGCACATCTAACAGCCAATATCAAAAGTGAAGATATCATCTCTGAAGGTCCACCAGTTTCAGCACCTGAAAAACCAATTACCAAGACGGAGATTCAAGAGAAGCCCAGAGATATTGACCGGAGTCCAGAAGAAAATGCTTTTTTAGATCCCCCGCACTTTGTTGCTGATGTTATAGATGAGGATCTGAGTACAGTGAATCTTTTAGATGCTGAGGCAAAAAGGACCAATTCAACTATACCGGAATATGATCAGTTTTCCCCAGATGCTACATCTGCATCTACATCAGAAGATACCTGTCTGGAATTACCACAGCTTCCACCATATGTTGAACTGTCCAAAGATCATGAAAGTAACATTAAACATATGGCAATTAAACATCTTATTGAGTTATACAAACATTTGCATGTGACAGATTGTCAGCAGTTTTGCATGCCATTACTTGCCCGAATGGTAGCTCAGATTGATGATGATGAAGAGTTTAGTTTGATGCTGCAAAAACATATCCTGGATGACCAGTGGCGGAAGGGCCATGAACTTGTATTGCATGTTTTGTACCATCTGCACTCGTGTGTTATGCTGGATTCAATTCCAAACTCTTCATCTGCTGCTGTTCTGTATGAAAAATTTCTCTTGGGTGTGGCCAAATCTGTGTTGGAGTTTTTCCCAGCTTCAGACAAGTCTTTTAGTAGACTTCTAGGTGAAGTGCCGCTTTTGCCTGAATCTGCGTTGAAGGTTTTGAATGATCTCTGCTATTCTCTTGATCATCATGGTAAAGTTGTCCGTGACATTGAACGTGTAACTCAAGGCCTTGGTGCGATATGGAGTTTGATATTGGGGCGTCCACAATATCGGCAGGCATGCTTGGATATAGCGTTAAAGTGTGCTGTTCACCCCCAGGATGAGATTAGAACAAAAGCTATTCGGCTGGTGGCAAACAAGCTTTATCAGCTGAGCTACATATCAGAAGATATTGAACAGTTTGCTAAACAGATGCTTCTGTCTGCTGTAGACCAAAAAGTCTTAGATATGGGTCTTTCTGAATCTGGACCTATTGAACAAGGAGCTGACGCAGAGATTGGAATTCAGGAAACACCAGGTCCACTGCAAGTTTCCGTATCCACCACATCTGAAAATGACCCCTCTAAACTTGCTAAACCAGTGGTTCCAAATGTGGTATCTGTGTCATTCTCTGAAGCTCAACGTCTCATATCATTGTTTTTTGCTTTATGCACAAAGAAACCCAGCCTTCTTCAGACTATCTTTGATGCCTATGCGCGAGCCCCAAAAACGGTAAAGCAGGCCATTCATCGTCACATTCCTATTCTTTTGAGGGCCTTAGGGCAATCATATTCTAAAGTTCTCCATATTATATCCGATCCACCGCAAGGAAGTGAAAACCTTCTAACATTGGTGTTGCAAATATTGATGCAAGAAACGACACAATCTGCTGATCTGATAGCTACTGTTAAGCATTTATATGAAACTAAATTAAGGGATGTTTCAATTCTTGTTCCCTTTCTTCCATCGCTTTCAAAAAATGAGGTTTTACCAATATTCCCTCGGCTTCTTGATCTTCCTTTGGAGAAGTTCCAAATGGCACTTGCTCATGTACTACAGGGTTCTGCTCATACAGGCCCAGCTTTGACACCTGTAGAAGTGCTGGTTGCTATCCATGGAATTGTTCCTGAGAAAGATGGCATTGCACTTAAGAAGATAACTGATGCTTGCACAGCTTGTTTTGAGCAACGTACTGTGTTCACACAACAGGTTCTGGCAAAAGCATTAAACCAGATGGTCGATCAAACTCCATTGCCTCTACTTTTCATGAGAACAGTTATTCAGGCAGTTGATGCTTTTCCAGTACTGGTTGATTTTGTTATGGAGATATTATCGAAACTTGTTAGTAAACAGGTGTGGCGGATGCCAAAACTTTGGGTTGGTTTCTTAAAATGTGTATATCAGACTCAGCCGCGTTCTTTTCATGTATTATTGCAGTTGCCGCCTCCACAACTAGAAAGTGCTCTCAACAAACATGCAAATCTCAGAGATCCTCTTGCTTCTTACGCCAGTCAACCCACTGTAAAATCTTCGCTACCTAGGTCAACATTAGTTGTGCTTGGTCTTGCAAATGAAACACAAATGCAGCAACATCCGTTGCACCCTTCTGACACAAGTTCTTCTGTTCACGGAGCAACTCTGACATGA 3996 0.4247 MATFPRDRVLSLLAAANNHGDLAVKISSLKQAKDILLSMEPSLAADIFSYLVELQSSPETLVRKLLIEVIEEISLRAAEHSPTLMSVLLAFLRDSDAIVVKQSIVSGTYIFCSVLAEMTVQYQQYDKVERWLEEIWMWMLKFKDAVFGIALEPGSVGTKLLALKFLETLVLLFSSDIIYPEKSPLEGGSKVFNISWLEVSHPVLDPVMLMSEASRIVGILLNLLQSAGSLPGCLTIAVVNCLAAIARKRPQHCNTVLPALLDFDPNFQTVKVCHTASIQYSLKTAFLGFLRCTHSPILESRERLVKSLRAMNVGDAAEQVIRQVDKLIRNGDRSTCDVRTSKDDYLSTQTPISGELSRKRPMPVDKEQLTNGHEVISKRIHSGPGPCSPLSVQIIDSEQDVNATSELSSNVPVPDSELSAVEQMIAMIGALLAEGERGAESLEILISKIHPDLLADIVITNMRHWPKTPPSLTRLGDLPVTQADTQRSHLRAVASAPIHSVQSTAITVQAPFPSATATATVTSLSDASNVNNLPADSKRDPRRDPRRLDPRRVAVNAAGTAISSMEDTSSVKSEFDESLSLSKPVSHSVVTNIDNAPAHLTANIKSEDIISEGPPVSAPEKPITKTEIQEKPRDIDRSPEENAFLDPPHFVADVIDEDLSTVNLLDAEAKRTNSTIPEYDQFSPDATSASTSEDTCLELPQLPPYVELSKDHESNIKHMAIKHLIELYKHLHVTDCQQFCMPLLARMVAQIDDDEEFSLMLQKHILDDQWRKGHELVLHVLYHLHSCVMLDSIPNSSSAAVLYEKFLLGVAKSVLEFFPASDKSFSRLLGEVPLLPESALKVLNDLCYSLDHHGKVVRDIERVTQGLGAIWSLILGRPQYRQACLDIALKCAVHPQDEIRTKAIRLVANKLYQLSYISEDIEQFAKQMLLSAVDQKVLDMGLSESGPIEQGADAEIGIQETPGPLQVSVSTTSENDPSKLAKPVVPNVVSVSFSEAQRLISLFFALCTKKPSLLQTIFDAYARAPKTVKQAIHRHIPILLRALGQSYSKVLHIISDPPQGSENLLTLVLQILMQETTQSADLIATVKHLYETKLRDVSILVPFLPSLSKNEVLPIFPRLLDLPLEKFQMALAHVLQGSAHTGPALTPVEVLVAIHGIVPEKDGIALKKITDACTACFEQRTVFTQQVLAKALNQMVDQTPLPLLFMRTVIQAVDAFPVLVDFVMEILSKLVSKQVWRMPKLWVGFLKCVYQTQPRSFHVLLQLPPPQLESALNKHANLRDPLASYASQPTVKSSLPRSTLVVLGLANETQMQQHPLHPSDTSSSVHGATLT 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0481 1331 SUPERFAMILY ARM repeat 10 914 IPR016024 -
Lele01g0481 1331 Pfam Symplekin tight junction protein C terminal 1096 1274 IPR022075 -
Lele01g0481 1331 Pfam Symplekin/PTA1 N-terminal 96 319 IPR032460 -
Lele01g0481 1331 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN-RELATED 2 1330 - -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 1310 1331 - -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 339 358 - -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 523 552 - -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 536 551 - -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 624 642 - -
Lele01g0481 1331 SUPERFAMILY ARM repeat 702 1238 IPR016024 -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 610 642 - -
Lele01g0481 1331 Gene3D - 2 336 IPR011989 -
Lele01g0481 1331 MobiDBLite consensus disorder prediction 341 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0481 Lele-ChrLele01 2836043 2854733 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0481 01 2836043 2854733 Lele01g0481 01 2836043 2854733 ECH
Lele01g0481 01 2836043 2854733 Lele03g0490 03 2854555 2867937 hybridization
Lele01g0481 01 2836043 2854733 Lele04g0486 04 2916835 2939365 hybridization