Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0441 ATGACTAACAAATTTCCGGAAGTGTCTCAGGGAGATGGCGGTACTTCTCTACCCTCTTCTCAGCCTGTGCCACCAGAGCATCAGCGTTCGCGTGGCAGCAATGGCAATACGATTTTCAAGAGTGGGCCACTTTCCATATCCTCGAAAGGAATTGGATGGACATCTTGGAAGAAAAGGTGGTTTGTTTTAACACGCACTTCACTTGTTTTCTTCAGAAGTGATCCAAATGTTGTTCCTCAGAAGGGGGGAGAAGCGAATTTAACGCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAAGCAGATAAGAAACTTTTGACTGTGGCTTTTCCTGATGGACGAGCTTTCACACTCAAGGCTGACACCGCAGAGGATTTACATGAATGGAAGACTGCACTTGAGAATGCTTTGGCGCAAGCCCCGGGTGCTTCTGATGTAACAGGGGAAAATGCGAAGGTTGTAGAACCAGCAAAATCTAAAACAGTTATTGGCCGGCCAATTTTACTTGCTCTGGAGGATGAAAATGGAGCTCCATCTTTTTTGGAGAAAGCCCTCAGGTTCATAGAAGAGCATGAAACAGGGGTCAAAGTTGAAGGGATCTTGCGACAAGCAGCTTCCGTTGATGATGTTGAATATCGATTTCGGGAATATGAACAGGGAAAAACTGAATTCTCTGCTGATGAGGATCCGCATGTTGTTGCCGATTGTTTGAAGTATGTACTCAGGGAATTACTTTCATCTCCAGTCCCTGCATCTTGCTGCAAGGCTCTGTTAGAAGCATGCCGAACTCAACGTGCTGGTAGGCTCTCTGCTATCCGTGGAGCAATATGTGAGACTTTCCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCCAAATGATGCAAACCGTGGCTTCCCACAAAACTGTGAATAGAATGAGCTCCTCCGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTGGCCGGGGAATGTGACATTGAAAATGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAGCAATTGTTATAACCTTATTAGAAGAATATGACAGCATATTTGGGGAGGAAGGATCTGGGTCCCCAGGCATATACTCTGATACAGAAGAGAGTGGATCTGGGAGCGAGGAGGGTACTGAAGATGATGAATCTTATGATGATGAGTGTGATGGAGAATCCATACAAGAGTCCGATGCAGATGCAGAGGGAAGTGAGAATGAAGACTCAGGGGGCAAGGATGATAAGAACCGTGATCATTCAAGGTCAGATGTAAAATCCTCAGGTGACAATGTAGATCCTAAAGTCAACCGGATATCATCACAGCCAAGTGAAGTCTCACTATCTCAGGATGTCGACATCAAGAGGCGTGAAAATCTGACGAGTTCAACCAAGACTGCTCCTGCAGAGAAATCCAGCACACCTGCTAACATAGTTGAAGTTGTTTCCACTGATCAGAGTCCAGCACATAATTCAAGTTTTCCTATTGACAACAAATCAATAGACATATCTGATGATCCAGCACATGCTGCGAGCCACACATTACTGGGGCGTACTTCTGCAATGAAGAATCTTGCCACTGAAACTGTTGATTCTTCCACCAATGCAGCTGAAATTGAGAATCTTGAAGCTACCAAGGTAGAATTGCAAAACCAAATCACAGAGGAGTCTAACGCAAACCTGCAATCTCATCTGGAAAAACAAAAGAAATCCATGCACGAGCGTCGTCTGGCTCTTGAGCAAGATGTGGCTAGACTAAGGGAACAGCTGAAAAAGGAGAAGAATTATTCTCCTAGATCGTCATCCAATTCAACCAGTGATGAAAAGACTGAGGCAGACCTTGAGGAAATAACTCTCGTAGAATCAGATCTCGCCAAGTTGCGGCAGAGGATTGATGATCTTGGCAGGCGGTTTAATTTACAACACGGGCACACTTCAAATCATGAAACAAAATTGAAGAATAAGCTGGATACTGAAGATGCAGTTACCTCTCTGTCTCAGATTGAAAAGTCAAAAAGCAAGGACGTTCAGTTCGGTGGAGCCGAAAGTGAGAATGAGAAAAAGTCGGAACTGACACCTTTATTGAACAAATATCCACTTCAAGTTGCTTCCAGAAAAGTTGGGGCAAAGGTTGAGCATCAGGTATCAAACTTCACCACTTCTAGACTGACGAAACTGTCCACCAGACTAAACTTTCTGAAGGAGCGTCGAAATCAAATGCAGCAACCACAGCCACCTCTCAATAATAAGCCTCGAGGAACTGAGACTCAATCTGTATCAAACCCAGAAAAGGGCAGAGCCATGGACAGTTCCCAGCCATCCCAAATTCGAGATAAAGGTTCAGGCAAAGAACCTCAATCGCTCCAAAATTCAGACAAGATGAGAAAATCAGAAAGTCAGTCAACCCATCATCCAGATAGATGGAATCAAAATCAATCCTCGGAAAGAGGAAGGTCCGAAGGCCATCAGTCTTATAATGTGGATAAAGGTCGATGA 2550 0.4471 MTNKFPEVSQGDGGTSLPSSQPVPPEHQRSRGSNGNTIFKSGPLSISSKGIGWTSWKKRWFVLTRTSLVFFRSDPNVVPQKGGEANLTLGGIDLNNSGSVVVKADKKLLTVAFPDGRAFTLKADTAEDLHEWKTALENALAQAPGASDVTGENAKVVEPAKSKTVIGRPILLALEDENGAPSFLEKALRFIEEHETGVKVEGILRQAASVDDVEYRFREYEQGKTEFSADEDPHVVADCLKYVLRELLSSPVPASCCKALLEACRTQRAGRLSAIRGAICETFPEPNRRLLQRILQMMQTVASHKTVNRMSSSAVAACMAPLLLRPLLAGECDIENDFDVGGDGSVQLLQAAAAANHAQAIVITLLEEYDSIFGEEGSGSPGIYSDTEESGSGSEEGTEDDESYDDECDGESIQESDADAEGSENEDSGGKDDKNRDHSRSDVKSSGDNVDPKVNRISSQPSEVSLSQDVDIKRRENLTSSTKTAPAEKSSTPANIVEVVSTDQSPAHNSSFPIDNKSIDISDDPAHAASHTLLGRTSAMKNLATETVDSSTNAAEIENLEATKVELQNQITEESNANLQSHLEKQKKSMHERRLALEQDVARLREQLKKEKNYSPRSSSNSTSDEKTEADLEEITLVESDLAKLRQRIDDLGRRFNLQHGHTSNHETKLKNKLDTEDAVTSLSQIEKSKSKDVQFGGAESENEKKSELTPLLNKYPLQVASRKVGAKVEHQVSNFTTSRLTKLSTRLNFLKERRNQMQQPQPPLNNKPRGTETQSVSNPEKGRAMDSSQPSQIRDKGSGKEPQSLQNSDKMRKSESQSTHHPDRWNQNQSSERGRSEGHQSYNVDKGR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0441 849 Pfam PH domain 40 140 IPR001849 -
Lele04g0441 849 MobiDBLite consensus disorder prediction 424 449 - -
Lele04g0441 849 SMART RhoGAP_3 178 370 IPR000198 GO:0007165
Lele04g0441 849 CDD PH 40 136 - -
Lele04g0441 849 Coils Coil 587 614 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 814 831 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 754 813 - -
Lele04g0441 849 Gene3D - 26 142 IPR011993 -
Lele04g0441 849 CDD RhoGAP 181 321 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 392 423 - -
Lele04g0441 849 SUPERFAMILY GTPase activation domain, GAP 177 375 IPR008936 -
Lele04g0441 849 Pfam RhoGAP domain 181 326 IPR000198 GO:0007165
Lele04g0441 849 Coils Coil 635 655 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 451 467 - -
Lele04g0441 849 SMART PH_update 38 143 IPR001849 -
Lele04g0441 849 ProSiteProfiles PH domain profile. 37 141 IPR001849 -
Lele04g0441 849 MobiDBLite consensus disorder prediction 608 630 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 681 710 - -
Lele04g0441 849 ProSiteProfiles Rho GTPase-activating proteins domain profile. 172 373 IPR000198 GO:0007165
Lele04g0441 849 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 14 706 - -
Lele04g0441 849 SUPERFAMILY PH domain-like 20 141 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 754 849 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 375 494 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 693 709 - -
Lele04g0441 849 Coils Coil 550 577 - -
Lele04g0441 849 MobiDBLite consensus disorder prediction 479 494 - -
Lele04g0441 849 Gene3D Rho GTPase activation protein 152 375 IPR008936 -
Lele04g0441 849 MobiDBLite consensus disorder prediction 1 41 - -
Lele04g0441 849 Pfam Leucine-zipper of ternary complex factor MIP1 590 656 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0441 Lele-ChrLele04 2593110 2603809 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0441 04 2593110 2603809 Lele04g0441 04 2593110 2603809 ECH
Lele01g0434 01 2546203 2550984 Lele04g0441 04 2593110 2603809 hybridization
Lele02g0430 02 2491213 2502825 Lele04g0441 04 2593110 2603809 hybridization