Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0430 ATGTTTGGAAATTATGACCCAAGAAAACTTGCGTTTTTTCCCTCCAATAAGGTGCTTCGTTTTGGAGGGCTGGCGTGTACAATTTCAATTGCCGCAGATGAGGAGGACCCTCTCTGTTGTCTTCATCACCATCGTTTCCGTGGCCTTGCATTTCTGACTCACCATTTCGAAGACAGAAAGAAACGGACAGGATCTCTGTTTTCACTTCCTCTCTTCTCATTTCATCACCTCTTTTCTTTTCGATTTCTGGCAAGGTATGTTACAATGCAGATTGATGAAACTCCATGCCTGAGCTGCATTGCCATTTTGATGAACGTGAGGGGAGATGGCGGTACTTTACCCTCTTCTCAGCCTGGGCCACCGGAGCATCAGCGTTCGCGTGGCAGCAATGGCAATAAGATTTTCAAGAGCGGGCCACTTTCCATATCCTCAAAAGGAATTGGATGGACATCTTGGAAGAAAAGGTGGTTTGTTTTAACACGCACTTCACTGGTTTTCTTCAGAAGTGATCCAAATGTTGTTCCTCAGAAGGGGGGTGAAGCGAATTTAACGCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTCGTCAAAGCAGATAAGAAACTTTTGACTGTGGCTTTTCCTGATGGACGAGCTTTCACACTCAAGGCTGACACCGCAGAGGATTTACATGAATGGAACACTGCACTTGAGAATGCTTTGGCGCAAGCCCCGGGTGCTTCTGATGTAACAGGGGAAAATGGTATCTTCAGGAACGATCAGACTGATTCAATTGATATTTCTTTGGACCAGTCGAAGGATGTAGAACCAGCAAAATCTAAAACAGTTATTGGCCGGCCAATTTTACTTGCTCTGGAGAATGAAAATGGAGCTCCATCTTTTTTGGAGAAAGCCCTCAGGTTCATAGAAGAGCATGGGGTCAAAGTTGAAGGGATCTTGCGACAAGCAGCTTCTGTTGATGATGTTGAATATCGATTTCGGGAATATGAGCAGGGAAAAACTGAATTCTCTGCTGATGAGGATCCGCATGTTGTTGCCGACTGTTTGAAGTATGTACTCAGGGAATTACTTTCATCTCCAGTCCCTGCATCTTGCTGCAAGGCTCTGTTAGAAGCATGCCGAACTGAACGTGCTGGTAGGCTCTCTGCTATCCGTGGTGCAATATGTGAGACTTTCCCTGAACCAAATCGCCGTTTATTGCAAAGAATACTCCAAATGATGCAAACCGTGGCTTCCCACAAAACACTGAATAGAATGAGCTCCTCCGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTGGCCGGGGAATGTGACATTGAAAATGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAACAATTGTTATAACCTTATTAGAAGAATATGACAGCATATTTGGGGAGGAAGGATCTGGGTCACCAGGCATATACTCTGATTCAGAAGAGAGTGGATCTGGGAGCGAGGAGGGTACTGAAGACGATGAATCTTATGATGATGAAGATTATGATGATGAGTGTGATGGAGAGTCCATACAAAAGTCCGATGCAGATGCAGAGGGAAGTGAGAATGAAGACTCAGGGGGCAAGGATGATAAGAACCGTGATCGTTCAAGGTCAGATGTAAAATACTCAGGTGACAATGTAGATCCTAAAGTCAACCAGATATCATCACAGCCAAGTGAAGTCTCACTATCTCAGGATGTTGACATCAAGAGGAGTGAAAATCTGACGAGTTCAACCAAGACTGCTCATGCAGAGAAGTCCAGCACACCTGCTAACATGGTTGAAGTTGTTTCCACTGATCAGAGTCCAGCACCAAATTCAAGTTTTCCTATTGACAACAAATCAATAGACATATCTGATGATCCAGCACATGCTGCGAGCCACACATTACTGGGGCATACTTCTGCAATGAAGAATCTTGCCACGGAAACTGTTGATTCTTCCACCAATGTAGCTGAAATTGAGAATCTTGAAGCTACCAAGGTAGAATTGCAAAACCAAATCACAGAGGACTTTAACGCAAACCTGCAATCTTATCTGAAAAAACAAAAGAAGTCCATACAAGAGCGTCGTCTGACTCTTGAGCAAGATGTGGCTAGACTACGGGAACAACTGCAAAAGGAGAAGAATTATTCTCCTAGATCCTCATCCAATTCAACCAGTGATGAAAAGACCAAGGCAGACCTTGAGGAAATGACTCTCGTAGAAGCAGATCTCGCCAAGTTACGGCAGAGGATTGACGATCTTGGCAGGCGGTTTAATTTACAACACGGGCACACTTCAAATCATGAAACAAAATTGAAGAATAAGCTGGATACTGAAGATGCAGTTACTTCTCAGTCTCAGATTGAAAAGTCAAAAAGCAAGGATGTTCAGTTTGGTGGACCCGAAAGTGAGAATGAGAAAAAGTCGGAACTGACATCTTTATTGAACAAATATCCACTTCAAGTTGCTTCCAGAAAAGTTGGGGCAAAGGTTGAGCATCAGGTATCAAACTTCACCACTTCTAGACTGACGAAACTGTCCACCAGACTAAACTTTCTGAAGGAGCGTCGAAATCAAATTCAGCAACCACAGCCACCTCTCAATAATAAGCCTCTAGGAACTGAGACTCAGTCTGTATCAAACCCAGAAAAGGGCAGAGCCATGGACAGTTCCCAGCCATCCCAAATTCCAGATAAAGGTTCAGGCAAAGAACTTCAATCGCTCCAAAATTCAGAAAAGACGAGAAAATCAGAAAGTCAGTCAACCCATCATCCAGATAGATGGAATCAAAATCAATCCTCGGAAAGAGGAAGGTCCGAAGGCCAGCAGTCTTATAATGTGGATAAAGTGTCAGGTGCGAGACTCATTTGTCATAGTGACAGCACTGTGGTTTTGTATTCACATTACCACCTTGGTAAAAGCAATATTGTAGTTTCTCGGTATATAAATGCAGATTATCCTCGGTATATAAATTCACGGGGCTTGCTTGATTACTTGCTGCCTAAATTTCAGCTTCAGGTATGGTAA 3069 0.4389 MFGNYDPRKLAFFPSNKVLRFGGLACTISIAADEEDPLCCLHHHRFRGLAFLTHHFEDRKKRTGSLFSLPLFSFHHLFSFRFLARYVTMQIDETPCLSCIAILMNVRGDGGTLPSSQPGPPEHQRSRGSNGNKIFKSGPLSISSKGIGWTSWKKRWFVLTRTSLVFFRSDPNVVPQKGGEANLTLGGIDLNNSGSVVVKADKKLLTVAFPDGRAFTLKADTAEDLHEWNTALENALAQAPGASDVTGENGIFRNDQTDSIDISLDQSKDVEPAKSKTVIGRPILLALENENGAPSFLEKALRFIEEHGVKVEGILRQAASVDDVEYRFREYEQGKTEFSADEDPHVVADCLKYVLRELLSSPVPASCCKALLEACRTERAGRLSAIRGAICETFPEPNRRLLQRILQMMQTVASHKTLNRMSSSAVAACMAPLLLRPLLAGECDIENDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYDSIFGEEGSGSPGIYSDSEESGSGSEEGTEDDESYDDEDYDDECDGESIQKSDADAEGSENEDSGGKDDKNRDRSRSDVKYSGDNVDPKVNQISSQPSEVSLSQDVDIKRSENLTSSTKTAHAEKSSTPANMVEVVSTDQSPAPNSSFPIDNKSIDISDDPAHAASHTLLGHTSAMKNLATETVDSSTNVAEIENLEATKVELQNQITEDFNANLQSYLKKQKKSIQERRLTLEQDVARLREQLQKEKNYSPRSSSNSTSDEKTKADLEEMTLVEADLAKLRQRIDDLGRRFNLQHGHTSNHETKLKNKLDTEDAVTSQSQIEKSKSKDVQFGGPESENEKKSELTSLLNKYPLQVASRKVGAKVEHQVSNFTTSRLTKLSTRLNFLKERRNQIQQPQPPLNNKPLGTETQSVSNPEKGRAMDSSQPSQIPDKGSGKELQSLQNSEKTRKSESQSTHHPDRWNQNQSSERGRSEGQQSYNVDKVSGARLICHSDSTVVLYSHYHLGKSNIVVSRYINADYPRYINSRGLLDYLLPKFQLQVW 1022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0430 1022 MobiDBLite consensus disorder prediction 775 825 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 723 746 - -
Lele02g0430 1022 CDD PH 136 232 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 527 563 - -
Lele02g0430 1022 SMART PH_update 134 239 IPR001849 -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 567 633 - -
Lele02g0430 1022 CDD RhoGAP 294 432 - -
Lele02g0430 1022 SUPERFAMILY GTPase activation domain, GAP 290 486 IPR008936 -
Lele02g0430 1022 SMART RhoGAP_3 291 481 IPR000198 GO:0007165
Lele02g0430 1022 Gene3D Rho GTPase activation protein 263 486 IPR008936 -
Lele02g0430 1022 Pfam PH domain 136 236 IPR001849 -
Lele02g0430 1022 ProSiteProfiles PH domain profile. 133 237 IPR001849 -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 485 639 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 809 825 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 117 133 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 111 133 - -
Lele02g0430 1022 Coils Coil 673 693 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 870 960 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 503 526 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 870 929 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 930 947 - -
Lele02g0430 1022 Coils Coil 751 771 - -
Lele02g0430 1022 MobiDBLite consensus disorder prediction 793 807 - -
Lele02g0430 1022 SUPERFAMILY PH domain-like 116 237 - -
Lele02g0430 1022 Coils Coil 703 730 - -
Lele02g0430 1022 Pfam RhoGAP domain 294 437 IPR000198 GO:0007165
Lele02g0430 1022 MobiDBLite consensus disorder prediction 775 792 - -
Lele02g0430 1022 ProSiteProfiles Rho GTPase-activating proteins domain profile. 285 484 IPR000198 GO:0007165
Lele02g0430 1022 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 120 822 - -
Lele02g0430 1022 Gene3D - 122 238 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0430 Lele-ChrLele02 2491213 2502825 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0430 02 2491213 2502825 Lele02g0430 02 2491213 2502825 ECH
Lele02g0430 02 2491213 2502825 Lele03g0449 03 2547114 2558793 hybridization
Lele02g0430 02 2491213 2502825 Lele04g0441 04 2593110 2603809 hybridization