Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0434 ATGATGCAAACCGTGGCTTCCCACAAAACTGTGAATAGAATGAGCTCCTCCGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGTCCCCTTCTGGCCGGGGAATGCGACATTGAAAATGATTTTGATGTGGGTGGTGATGGTTCTGTTCAACTTCTACAAGCAGCTGCTGCAGCTAACCATGCTCAAACAATTGTTATAACCTTATTAGAAGAATATGAGAGCATATTTGGGGAGGAAGGATCTGGGTCCCAAGGCATATACTCTGATTCAGAAGAGAGTGGATCGGGGAGTGAGGAGGGTACTGAAGATGATGAATCTTATGATGATGATGATTATGATGATGAGTGTGATGAAGAATCCATACAAGAGTCCGATGCAGATGCAGAGGGAAGTGAGACTGAAGACTCAGGGGGCAAGGATGATAAGAAACGTGATCACTCAGGTGACAATGTAGATCCTAAAGTCAACCAGATATCATCACAGCCAAGTGAAGTCTCACTATCTAAGGATGTCGACATCAAGAGCCGTGAAAATCTAACGAGTTCAACCAAGCCTGCTCGTGCAGAGAAGTCCAGCACACCTGCTAACATAGTTGAAGTTGTTTCCACTGACCAGAGTCCAGCAAGTAATTCAAGTTGTCCTATTGACAACAAATCAATAGACATTTCTGATGATCCAGCACATGCTGCGAGCCACACATTACTGGGGCGTACTTCTTCTAACACAAACCTGCAATCTTATCGGGAAAAACAAACGAAATCCATGCATGAGCGTCGTCTGGCTCTTGAGCAAGATGTGGCTAGACTACGGGAACAACTGCAAAAGGAGAAGAATTATTCTCCTAGATCCTCATCTAATTCAACCACTGATGAAAAGACCAAGGCAGACCTTGAGGAAATAACTCTCATAGAAGCAGATCTCGCCAAGTTACGGCAGCGGATTGACGATCTTGGCAGGCGGTTTAATTTACAATATGAGCACACTTCAAATCCTGAAACAAAATTGTATGTTAGTCACTTGAAGAATAAGCTGGATGCTGAAGATGCGGTTACTTCTCAGTCTCAGATTGAAAAGTCAAAAAGCAAGGACGTTCAGTTTGGTGGAGCCGAAAGTGAGAATGAGAAAAAGTCGGACCTAACGTCTTTATTGAACAAATATCCACTTCAAATGACTTCCAGAAAAGTTGGGGCAAAGGTTGAGGTATCAAACTTCACTACTTCTAGACTGACGAAACTGTCCACCAGACTAAACTTTCTGAAGGAGCGTCGAAATCAAATTCAACAACCACAGCCACCTCTCAATAATAAGCCTCGAGGATCTGAAACTCCTTCTGTATCAAACCCAGAAAAGGGCAGAGCCATAGACAGTTCCCAGCCATCCCAAATTCCAGATAAAGGTTCAGGCAAAGAACCTCAGTCGCTCCAAAATTCAGACAAGATGAGAAAATCAGAAAGTCAGTCAACCCATCATCCAGATAAATGGAATCCAAATCAATCCTCGGAAAGAGGAAGGTCCGAAGGCCATCAGTCTTATAATGTCGATAAAGGCCCATGA 1557 0.438 MMQTVASHKTVNRMSSSAVAACMAPLLLRPLLAGECDIENDFDVGGDGSVQLLQAAAAANHAQTIVITLLEEYESIFGEEGSGSQGIYSDSEESGSGSEEGTEDDESYDDDDYDDECDEESIQESDADAEGSETEDSGGKDDKKRDHSGDNVDPKVNQISSQPSEVSLSKDVDIKSRENLTSSTKPARAEKSSTPANIVEVVSTDQSPASNSSCPIDNKSIDISDDPAHAASHTLLGRTSSNTNLQSYREKQTKSMHERRLALEQDVARLREQLQKEKNYSPRSSSNSTTDEKTKADLEEITLIEADLAKLRQRIDDLGRRFNLQYEHTSNPETKLYVSHLKNKLDAEDAVTSQSQIEKSKSKDVQFGGAESENEKKSDLTSLLNKYPLQMTSRKVGAKVEVSNFTTSRLTKLSTRLNFLKERRNQIQQPQPPLNNKPRGSETPSVSNPEKGRAIDSSQPSQIPDKGSGKEPQSLQNSDKMRKSESQSTHHPDKWNPNQSSERGRSEGHQSYNVDKGP 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0434 518 MobiDBLite consensus disorder prediction 133 152 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 364 379 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 179 219 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 423 482 - -
Lele01g0434 518 SUPERFAMILY GTPase activation domain, GAP 2 79 IPR008936 -
Lele01g0434 518 MobiDBLite consensus disorder prediction 349 379 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 80 258 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 483 500 - -
Lele01g0434 518 Coils Coil 301 321 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 423 518 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 96 132 - -
Lele01g0434 518 Pfam Leucine-zipper of ternary complex factor MIP1 256 322 IPR025757 -
Lele01g0434 518 ProSiteProfiles Rho GTPase-activating proteins domain profile. 1 77 IPR000198 GO:0007165
Lele01g0434 518 MobiDBLite consensus disorder prediction 274 294 - -
Lele01g0434 518 MobiDBLite consensus disorder prediction 234 250 - -
Lele01g0434 518 Gene3D Rho GTPase activation protein 1 85 IPR008936 -
Lele01g0434 518 MobiDBLite consensus disorder prediction 153 169 - -
Lele01g0434 518 Coils Coil 260 280 - -
Lele01g0434 518 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 239 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0434 Lele-ChrLele01 2546203 2550984 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0434 01 2546203 2550984 Lele01g0434 01 2546203 2550984 ECH
Lele01g0434 01 2546203 2550984 Lele03g0449 03 2547114 2558793 hybridization
Lele01g0434 01 2546203 2550984 Lele04g0441 04 2593110 2603809 hybridization