Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0416 ATGGCGCTTCGTTTTGAGATTCTTGGCAGGTTCAACCGGGCTCGTGCAGCTCGATTGACACTCCCCCACTTTGTGTGCCAGACGCCTTTATTTATGCCAGTGGGCACACAAGGAACAATAAAAGGACTGACCACAAACCAGCTCGAGGAGATTGGTTGCCAAATAATACTTGGAAATACTTACCACCTGGCACTTCGACCAACTTCTGAACTTCTTGATGAAGCTGGCGGTCTTCATAAATTTATGAACTGGCCACGGGCTCTACTTACAGACTCTGGTGGCTTCCAGATGGTATCACTATTGCATCTTGCTGATATCACTGAAAAAGGTGTGACATTTCAGTCACCGGTTGATGGAAAACCAATGCTCTTAACCCCCGAGGAATCTGTTCAGATCCAAAACAGAATTGGAGCAGATATTATTATGGCTCTTGATGATGTTGTTAAGACCACTATTACTGGTCTACGAATAGAGGAAGCCATGTATCGAACACTCAGATGGATAGACAGATGTATAGCAGCACACAAGAGACCTCATGAGCAGAACTTGTTTGGTATCGTACAAGGTGGTTTAGATCCTGTCTTGAGGGATATATGTGTTAGAGGCTTGGTGGATCGCAATTTGCCGGGTTATGCTATTGGTGGTCTTGCTGGTGGTGAAGATAAAGATTCATTTTGGCGTGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAAGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGACATAGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGACTGTGTTTATCCTACCCGTACTGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTACTGAAACTTAAACATAGAGCCATGGCTGATGACACTCGTCCCATCGATCCTTCCTGCTCTTGCATGGTGTGCAAGAACTACACCAGGGCTTACATCCATTGTCTTGTGACAAAAGACGCTATGGGGTCTCAGCTTCTGTCATATCATAATTTGTATTACATTATGCAGCTCAGCAGGGACCTAAACTCATCAATAATCGAGGGAAGGTTCCCAAAGTTTGTATGTGACTTTCTACGCAAAATGTTCCCGGAAGGTGATGTTCCAGAATGGGTCTGCAATGCTATGGAGGTGGCTGGAATTGACATTTCCTCCTGCTGTGCTCCGTTCTCATCATACCAAGAACACAATTCCGAAAATTGTTTTAGGGAGGAGGAGATAGAAATGAAGTCGGGCAGAGTTTGA 1254 0.4506 MALRFEILGRFNRARAARLTLPHFVCQTPLFMPVGTQGTIKGLTTNQLEEIGCQIILGNTYHLALRPTSELLDEAGGLHKFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESVQIQNRIGADIIMALDDVVKTTITGLRIEEAMYRTLRWIDRCIAAHKRPHEQNLFGIVQGGLDPVLRDICVRGLVDRNLPGYAIGGLAGGEDKDSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDPSCSCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYIMQLSRDLNSSIIEGRFPKFVCDFLRKMFPEGDVPEWVCNAMEVAGIDISSCCAPFSSYQEHNSENCFREEEIEMKSGRV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0416 417 SUPERFAMILY tRNA-guanine transglycosylase 1 364 IPR036511 GO:0006400|GO:0016763
Lele04g0416 417 Gene3D - 1 366 IPR036511 GO:0006400|GO:0016763
Lele04g0416 417 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 5 365 IPR002616 GO:0006400|GO:0016763
Lele04g0416 417 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 2 389 - -
Lele04g0416 417 Pfam Queuine tRNA-ribosyltransferase 13 365 IPR002616 GO:0006400|GO:0016763
Lele04g0416 417 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 5 365 IPR004803 GO:0008479|GO:0101030
Lele04g0416 417 Hamap Queuine tRNA-ribosyltransferase [tgt]. 3 364 IPR004803 GO:0008479|GO:0101030
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0416 Lele-ChrLele04 2465938 2471576 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0416 04 2465938 2471576 Lele04g0416 04 2465938 2471576 ECH
Lele01g0410 01 2407231 2412390 Lele04g0416 04 2465938 2471576 hybridization
Lele02g0408 02 2370941 2376519 Lele04g0416 04 2465938 2471576 hybridization