Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0408 ATGGCGCTGCGTTTTGAGATTCTTGGCAGGTTCAACCGGGCTCGTGCAGCTCGATTGACACTCCCCCACTATGTGTGCCAGACGCCTTTATTTATGCCAGTGGGCACACAAGGAACAATAAAAGGAATGACAACAAACCAGCTCGAGGAGATTGGTTGCCAAATAATACTTGGAAATACTTACCACTTGGCACTTCGACCAACTTCTGAACTTCTTGATGAAGCTGGCGGTCTTCATAAATTTATGAACTGGCCACGGGCTCTACTTACAGACTCTGGTGGCTTCCAGATGGTATCACTATTGCATCTTGCTGATATCACTGAAAAAGGCGTGACATTTCAGTCACCAGTTGATGGAAAACCAATGCTCTTAACCCCTGAGGAATCTATTCAGATCCAAAACAGAATTGGAGCAGATATTATTATGGCTCTTGATGATGTTGTTAAGACCACTATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACACTCAGATGGATAGACAGATGTATAGCAGCACACAAGAGACCTCATGAGCAGAACTTGTTTGGTATCGTACAAGGTGGTTTAGATCCTGTCTTGAGAGGCTTGGTGGATCGCAATTTGCCGGGTTATGCTATTGGTGGTCTTGCTGGTGGTGAAGATAAAGATTCATTTTGGCGTGTTGTTGCTCAGTGCACTGCTGCTTTGCCAGAAGATAAACCACGATATGTTATGGGAGTTGGTTATCCACTTGACATAGTTGTTTGTAGTGCTTTGGGTGCTGACATGTATGACTGTGTATATCCTACCCGTACTGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTACTGAAACTTAAACATAGAGCCATGGCTGACGATACTCGTCCCATCGATCCTTCCTGCTCTTGCATGGTGTGCAAGAACTACACCAGGGCTTACATCCATTGTCTTGTGACAAAAGACGCTATGGGGTCTCAGCTTCTGTCGTATCATAATTTGTATTACATTATGCAGCTCAGCAGGGACCTAAACTCATCAATAATCGAGGGAAGGTTCCCAAAGTTTGTATGTGACTTTCTAAGCAAAATGTTCCCGAAAGGTGATGTTCCAGAATGGGTCTGCAATGCTATGGAGGTGGCTGGAATTGACATTTCCTCCTGCTGTGCTCCGTTCTCATCATACCAAGAACACAATTCCGAAAATTGTTTTAGGGAGGAGATAGAAATGAGGTCGGGCAGAGTTTGA 1236 0.449 MALRFEILGRFNRARAARLTLPHYVCQTPLFMPVGTQGTIKGMTTNQLEEIGCQIILGNTYHLALRPTSELLDEAGGLHKFMNWPRALLTDSGGFQMVSLLHLADITEKGVTFQSPVDGKPMLLTPEESIQIQNRIGADIIMALDDVVKTTITGPRIEEAMYRTLRWIDRCIAAHKRPHEQNLFGIVQGGLDPVLRGLVDRNLPGYAIGGLAGGEDKDSFWRVVAQCTAALPEDKPRYVMGVGYPLDIVVCSALGADMYDCVYPTRTARFGTALVPEGVLKLKHRAMADDTRPIDPSCSCMVCKNYTRAYIHCLVTKDAMGSQLLSYHNLYYIMQLSRDLNSSIIEGRFPKFVCDFLSKMFPKGDVPEWVCNAMEVAGIDISSCCAPFSSYQEHNSENCFREEIEMRSGRV 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0408 411 Hamap Queuine tRNA-ribosyltransferase [tgt]. 3 359 IPR004803 GO:0008479|GO:0101030
Lele02g0408 411 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 5 360 IPR002616 GO:0006400|GO:0016763
Lele02g0408 411 Pfam Queuine tRNA-ribosyltransferase 13 360 IPR002616 GO:0006400|GO:0016763
Lele02g0408 411 TIGRFAM Q_tRNA_tgt: tRNA-guanine transglycosylase 5 360 IPR004803 GO:0008479|GO:0101030
Lele02g0408 411 SUPERFAMILY tRNA-guanine transglycosylase 1 358 IPR036511 GO:0006400|GO:0016763
Lele02g0408 411 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 2 384 - -
Lele02g0408 411 Gene3D - 1 362 IPR036511 GO:0006400|GO:0016763
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0408 Lele-ChrLele02 2370941 2376519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0408 02 2370941 2376519 Lele02g0408 02 2370941 2376519 ECH
Lele02g0408 02 2370941 2376519 Lele03g0422 03 2412310 2416988 hybridization
Lele02g0408 02 2370941 2376519 Lele04g0416 04 2465938 2471576 hybridization