Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0410 ATGCCAGTGGGCACACAAGGAACAATAAAAGGACTAACAACAAACCAGCTCGAGGAGGTTGGTTGCCAAATAATACTCGGAAATACTTACCACTTGGCGCTTCGACCAACTTCTGAACTTCTTGATCAAGCTCGCGGTCTTCATCAATTTATGAACTGGTATCACTATTGCATCTTGCTGATATCCACTGAAAAAGGTGTGACATTTCAGTCACCAGTTGATGGAAAACCAATGCTCTTAACCCTTGAGGAATCTATTCAGATCCAAAACAGAATTAGAGCACATATTATTATGGCTCTTGACGATGTTGTTGGGACCACTATTACTGGTCCACGAATAGAGGAAGCCATGTATCGAACACTCAGATGGATAGACAGATGTATAGCAGATAATGCAATCAGGGATATATGTGTCAGAGGCTTGGTGGATCGCAATTTACCAGGTTATGCTATTGGTGGTCTTGCTGGTGGTGAAGATAAAGATTCATTTTGGCTTGTTGTTGCTCTGTGCACTGCTGCTTTGCCAGAAGATAAACCACGATATTTGTTTGTAGCTCTTTGGGTGCCCGACATGTATGACTGTGTTTATCCTACCCGTACTGCACGCTTTGGCACTGCTCTTGTTCCTGAGGGAGTACGGAAACTTAAACATAGCACCATGGCTGATGACACTCGTCCCATCGATCCTTCCTGCTCTTTTATGGTGTGCAAGAACTACACCAGGGCTTACATCCATTGTCTTGGTACAAAAGATGCTATGGGGTCTCAGCTTCTGTCATATCATAATTTGTATTACATTATGCAGTTCCCGGAAGGTGATGTTCCAGAATGGGTCCTCATGCTGCAATGCTATGGAGGTGGGCTGGAATTGACATTCTTCCTGCTGTGCTCCGTTCTCATCATACCAAGAACACAATTCCCAAAATTATCTTAG 933 0.4362 MPVGTQGTIKGLTTNQLEEVGCQIILGNTYHLALRPTSELLDQARGLHQFMNWYHYCILLISTEKGVTFQSPVDGKPMLLTLEESIQIQNRIRAHIIMALDDVVGTTITGPRIEEAMYRTLRWIDRCIADNAIRDICVRGLVDRNLPGYAIGGLAGGEDKDSFWLVVALCTAALPEDKPRYLFVALWVPDMYDCVYPTRTARFGTALVPEGVRKLKHSTMADDTRPIDPSCSFMVCKNYTRAYIHCLGTKDAMGSQLLSYHNLYYIMQFPEGDVPEWVLMLQCYGGGLELTFFLLCSVLIIPRTQFPKLS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0410 310 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 1 129 IPR002616 GO:0006400|GO:0016763
Lele01g0410 310 TIGRFAM tgt_general: tRNA-guanine family transglycosylase 133 269 IPR002616 GO:0006400|GO:0016763
Lele01g0410 310 SUPERFAMILY tRNA-guanine transglycosylase 1 270 IPR036511 GO:0006400|GO:0016763
Lele01g0410 310 Gene3D - 1 272 IPR036511 GO:0006400|GO:0016763
Lele01g0410 310 Pfam Queuine tRNA-ribosyltransferase 1 269 IPR002616 GO:0006400|GO:0016763
Lele01g0410 310 PANTHER QUEUINE TRNA-RIBOSYLTRANSFERASE CATALYTIC SUBUNIT 1 130 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0410 Lele-ChrLele01 2407231 2412390 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0410 01 2407231 2412390 Lele01g0410 01 2407231 2412390 ECH
Lele01g0410 01 2407231 2412390 Lele03g0422 03 2412310 2416988 hybridization
Lele01g0410 01 2407231 2412390 Lele04g0416 04 2465938 2471576 hybridization