Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0343 ATGCATCCGTTTTGCTGCGTCTCCGCCGTTTCTGATCAGTCTTCGCCAGTCAAACCATCTCCCGCTCCCTTCCCTAGTTTCCATATGCATCCTCCTCTGCCCCCCGCCGCCCCTGCCTCCGCTATTCGATCCGATTCGATTCCCCGGGCCAATAACCACAACCACACGAATAGTAATCACGGCTTCGGCGAGTGTGGACGGCTGAGTCCGCTAGAGCAGCAGCAACCGGCGGTGGATGTGAAGATCAATGACTTGGTTGGGAATGGAATCTCGGGGATACTGTATAAGTGGGTCAACTACGGTAAAGGCTGGAGACCTCGATGGTTCGTCCTTCAAGACGGCGTACTTTCTTACTATAAGATCCACGGGCCCGATAAGATCGTCGTCAATAAAGAAACCGAGAAGGGTTCTAGGGTCATTGGCGAAGAATCCATGCGAAGGATCACGCGCAACCGCAATTCTTATTCCCCACATCAGCAGTCCCTCCATCGACGAAAGCCCTTTGGAGAAGTCCATCTCAAGGTTTCGACTATTCGCGAAAGCAGGTCAGATGATAAGCGGTTTTCCATTTTCACTGGAACTAAGAGACTCCACTTGAGGGCTGAGACCCGTGAAGATCGAGTGGCATGGGTGGAGGCATTGCAGGCAGTGAAAGATATGTTCCCGCGAATGTCCAACAGTGAGCTGATGGCTCCGTTAGACTATCTAACGATTTCAACTGACAAACTGAGACAACGGCTTCTGGAAGAAGGTGTAAGTGAGGAAGCCATCCAAGACAGTGAACAAATTATGAGAAGTCAATTTGTAGCACTACAAAATCAGCTTGTGCTGCTGAAGCAGAAGCAGTTGATTCTCATGGACACGCTACGACAGCTAGAGACAGAAAAAGTTGATCTGGAGAATACAGTTGTTGATGAGAGTCAAAGACAGTGGAATGATGAAGAGTCTTTTTCCAGATCAAAGCATGAAAAGTTTAGTGAAGGAAGTGCAAGTGAATCTGAGGATTATAATGAGAGAAATGATGCTGCAGAGGAAGAAACAGATGATGAAGACAATGCCTTTTTTGACACACGAGACTTTCTATCATCGAGTTCTTTTAAAAGTAATGGTTCTGATTATAGGGTTTCATCTTTCTCTTCGGACGATGAAGTACTTTATGCGATAGAGTCAGAGGAGGATGTAGATCCATCAATAAGATCAGTTGGAACCAGCTATCCCTATGTTAAACGGCGTAAGAAATTGCCTGACCCTATTGAAAAAGAGAAAGGCGTCAGTCTTTGGTCGATGATTAAGGATAATATTGGAAAGGATCTAACAAAAGTATGTCTTCCTGTTTATTTCAATGAGCCTCTTTCGTCTTTGCAAAAATGTTTTGAAGAAATGGAGTACTCATATCTCTTGGATCGAGCGTATGAATGGGGAAAAAGGGGTAATAACCTCATGAGGATTCTTAACGTGGCTGCTTTTGCTGTATCTGGCTATGCCTCAACTGAAGGAAGAATTTGCAAACCATTTAATCCTTTACTAGGAGAAACATATGAGGCTGATTACCCAGATAAAGGACTTCGTTTTTTCTCAGAGAAGGTTAGTCATCACCCTATGATAGTTGCATGTCTCTGTCAAGGCACAGGTTGGAAATTTTGGGGAGATAGCAACTTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAAGTTTTTCAGTGGAGTAAGGTGACAACGTCAATATACAATCTCATATTAGGGAAGCTGTACTGTGATCACTATGGAACAATGCGTATACAAGGAAACGGAGATTACTCATGTAAACTGAAATTCAAGGAGCAATCTATAATTGATCGAAATCCCCACCAGGTACACGGTATAGTTCAAGATAAGAATGGAAAAACAGTGGCAACTCTTTTCGGAAAATGGGATGAAAGTATGCATTATGTTTCTGGGGACTTTGCTGTGAAGGGAAAAGGTTACGACTCCTTGTCAGAAGCACGACTCCTGTGGAAGGGGAGCAAGCCTCCAAAGTTCCCTACTAGATATAATTTCACTCGCTTTGCCATCACATTAAATGAACTTACACCTGGTTTGAAGGAAAAACTGCCACCAACAGATTCCAGGTTGAGGCCAGACCAGAGGTATTTGGAAAATGGGGAGTATGAAATGGCGAATTCAGAAAAGTTGCGGCTAGAGCAGCGGCAACGCCAGGCTCGTAAGATGCAGGAGAGCGGTTGGCAACCTCGGTGGTTCGCCTTAGACAAAGCAAGCGGCAGTTACCGCTATTTGGGAGGGTACTGGGAAGCCAGGGAACGAGGAAATTGGGAATCTTGCCCTGACATTTTTGGTCAAATACCCGCTGACCATCTTTCTGATTGA 2406 0.4497 MHPFCCVSAVSDQSSPVKPSPAPFPSFHMHPPLPPAAPASAIRSDSIPRANNHNHTNSNHGFGECGRLSPLEQQQPAVDVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNKETEKGSRVIGEESMRRITRNRNSYSPHQQSLHRRKPFGEVHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTISTDKLRQRLLEEGVSEEAIQDSEQIMRSQFVALQNQLVLLKQKQLILMDTLRQLETEKVDLENTVVDESQRQWNDEESFSRSKHEKFSEGSASESEDYNERNDAAEEETDDEDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDEVLYAIESEEDVDPSIRSVGTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGKRGNNLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACLCQGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNGDYSCKLKFKEQSIIDRNPHQVHGIVQDKNGKTVATLFGKWDESMHYVSGDFAVKGKGYDSLSEARLLWKGSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWQPRWFALDKASGSYRYLGGYWEARERGNWESCPDIFGQIPADHLSD 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0343 801 Coils Coil 730 750 - -
Lele04g0343 801 MobiDBLite consensus disorder prediction 338 352 - -
Lele04g0343 801 FunFam Oxysterol-binding protein-related protein 2A 722 793 - -
Lele04g0343 801 FunFam oxysterol-binding protein-related protein 1D isoform X1 511 683 - -
Lele04g0343 801 Gene3D - 511 682 - -
Lele04g0343 801 Pfam Pleckstrin homology domain 95 215 - -
Lele04g0343 801 CDD PH_ORP_plant 90 226 - -
Lele04g0343 801 Gene3D - 722 782 - -
Lele04g0343 801 SUPERFAMILY Oxysterol-binding protein-like 420 795 IPR037239 -
Lele04g0343 801 Coils Coil 333 353 - -
Lele04g0343 801 SUPERFAMILY PH domain-like 90 219 - -
Lele04g0343 801 MobiDBLite consensus disorder prediction 308 352 - -
Lele04g0343 801 MobiDBLite consensus disorder prediction 308 337 - -
Lele04g0343 801 Gene3D - 88 221 IPR011993 -
Lele04g0343 801 SMART PH_update 88 221 IPR001849 -
Lele04g0343 801 Coils Coil 289 309 - -
Lele04g0343 801 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 89 779 IPR000648 GO:0008289
Lele04g0343 801 ProSiteProfiles PH domain profile. 87 219 IPR001849 -
Lele04g0343 801 MobiDBLite consensus disorder prediction 11 30 - -
Lele04g0343 801 Pfam Oxysterol-binding protein 425 780 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0343 Lele-ChrLele04 2011171 2016681 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0343 04 2011171 2016681 Lele04g0343 04 2011171 2016681 ECH
Lele01g0339 01 1965346 1970947 Lele04g0343 04 2011171 2016681 hybridization
Lele02g0334 02 1893558 1899030 Lele04g0343 04 2011171 2016681 hybridization