Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0339 ATGCATCCCTTCTGCTGCGTCTCCGCCGTTTCTGATCAATCTTCGCCGGTCAAACCCTCTCCCGCTCCCTTCCCTAGTTTCCATATGCCTCCTCCTCTTCCCCCCGCCGCCCCCGCCTCCGCCATTCGATCCGATTCGATTCCCCGCGCCAATAACCACAGCCACACCGGCTTCGGCGAGTGTGGGCGGCTGAGTCCGCGAGAGCAGCAACAACCGGCGGTGGATGTGAAGATCAATGACTTGGTTCTGAATGGAATATCGGGGATACTGTATAAGTGGGTCAATTACGGTAAAGGCTGGAGACCTCGATGGTTCGTCCTTCAAGACGGCGTACTTTCTTACTATAAGATCCACGGGCCCGATAAGATCGTCGTCAATAAAGAAACCGAGAAGGGTTCTAAGGTCATTGGCGAAGAATCCATGCGAAGGATCTCGCGCAACCGCAATTCTTATTCCCCTCATCAGCAGTCCCTGCATCGACGAAAGCCCTTTGGAGAAGTCCATCTCAAGGTTTCGACTATTCGCGAAAGCAGGTCAGATGACAAGCGGTTTTCCATTTTCACTGGAACTAAGAGACTCCACTTGAGGGCTGAGACCCGTGAAGATCGAGTGGCATGGGTGGAGGCATTGCAGGCAGTGAAAGATATGTTCCCGCGAATGTCCAACAGTGAGCTGATGGCTCCGTTAGACTATCTAACGATTTCAACTGACAAACTGAGACAACGGCTTCTGGAAGAAGGTGTAAGTGAGGAAGCCATCCAAGACAGTGAACAAATCATGAGAGGTGAATTTGTAGCACTACAAAATCAGCTTGTGCTGCTGAAGCAGAAGCAGTTGATTCTCATGGACACATTACGACAGCTAGAGACAGAAAAAGTTGATCTGGAGAATACAGTTGTTGATGAGAGCCAAAGACAGTGGAGTGATGAAGAGGCTTTTTCCAGATCAAAGCATGAGAAGTTTAGTGAAGGAAGTGCAAGTGAATCTGAGGATTATAATGAGAGAAATGATGCTGCAGAGGAAGAAACAGATGATGAAGACAATGCCTTTTTTGACACACGAGACTTTCTATCATCGAGTTCTTTTAAAAGTAATGGTTCTGATTATAGGGTTTCATCTTTCTCTTCAGACGATGAAGGACTTTATGCGATAGAGTCAGCAGAGGATGTAGATCCATCAATAAGATCAGTTGGAACCAGCTATCCCTATGTTAAACGGCGTAAGAAATTGCCTGACCCTATTGAAAAAGAGAAAGGCGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAGGATCTAACAAAAGTATGTCTTCCTGTTTATTTCAATGAGCCACTTTCGTCTTTGCAAAAATGTTTTGAAGAAATGGAGTACTCATATCTCTTGGATCGAGCATATGAATGGGGAAAAAGGGGTAATAGCCTCATGAGGATTCTTAACGTGGCTGCTTTTGCTGTATCTGGGTATGCCTCAACTGAAGGAAGAATTTGCAAACCTTTTAATCCTTTATTAGGGGAAACATATGAGGCTGATTACCCAGATAAAGGACTTCGTTTTTTCTCAGAGAAGGTTAGCCATCATCCTATGGTAGTTGCATGTCACTGTCAAGGCACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGATGATGGGGAAGTTTTTCAGTGGAGTAAGGTGACAACGTCAATATACAATCTCATATTAGGGAAGCTGTACTGTGATCACTATGGAACAATGCGTATACAAGGAAATGGAGATTACTCATGTAAACTGAAATTCAAGGAGCAATCTATAATTGATCGAAATCCCCACCAGGTACACGGTATAGTTCAAGATAAGAATGGAAAAACAGTGGCAACTCTTTTCGGAAAATGGGATGAAAGTATGCATTATGTTTCTGGAGACTTTGCTGTGAAGGGAAAAGGTTACGACTCTTTGTCAGAAGCACGAGTCCTGTGGAAGCGGAGCAAGCCTCCAAAGTTCCCTACTAGATATAATTTCACTCGCTTTGCCATCACATTAAATGAACTTACACCTGAATTGAAGGAAAAGCTGCCACCAACAGATTCCAGGTTGAGGCCAGACCAGAGGTATCTGGAAAATGGGGAGTATGAAATGGCAAATTCAGAAAAATTGCGGCTAGAGCAGCGGCAACGCCAGGCTCGGAAGATGCAGGAGAGCGGTTGGAAACCACGGTGGTTCACCTTAGACAAAGCAAGCGGCACTTACCTCTATTTGGGAGGGTATTGGGAAGCCAGGGAACGAGGAAATTGGGAATATTGTCCTGACATTTTTGGTCAAATCCCCTCTGACCATCTTTCTGATTGA 2394 0.4503 MHPFCCVSAVSDQSSPVKPSPAPFPSFHMPPPLPPAAPASAIRSDSIPRANNHSHTGFGECGRLSPREQQQPAVDVKINDLVLNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNKETEKGSKVIGEESMRRISRNRNSYSPHQQSLHRRKPFGEVHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTISTDKLRQRLLEEGVSEEAIQDSEQIMRGEFVALQNQLVLLKQKQLILMDTLRQLETEKVDLENTVVDESQRQWSDEEAFSRSKHEKFSEGSASESEDYNERNDAAEEETDDEDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDDEGLYAIESAEDVDPSIRSVGTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGKRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNGDYSCKLKFKEQSIIDRNPHQVHGIVQDKNGKTVATLFGKWDESMHYVSGDFAVKGKGYDSLSEARVLWKRSKPPKFPTRYNFTRFAITLNELTPELKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQESGWKPRWFTLDKASGTYLYLGGYWEARERGNWEYCPDIFGQIPSDHLSD 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0339 797 MobiDBLite consensus disorder prediction 334 348 - -
Lele01g0339 797 Coils Coil 726 746 - -
Lele01g0339 797 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 86 775 IPR000648 GO:0008289
Lele01g0339 797 Pfam Oxysterol-binding protein 421 776 IPR000648 GO:0008289
Lele01g0339 797 Gene3D - 507 681 - -
Lele01g0339 797 FunFam Oxysterol-binding protein-related protein 2A 718 789 - -
Lele01g0339 797 ProSiteProfiles PH domain profile. 83 215 IPR001849 -
Lele01g0339 797 CDD PH_ORP_plant 86 222 - -
Lele01g0339 797 Coils Coil 329 349 - -
Lele01g0339 797 SMART PH_update 84 217 IPR001849 -
Lele01g0339 797 FunFam oxysterol-binding protein-related protein 1D isoform X1 507 679 - -
Lele01g0339 797 MobiDBLite consensus disorder prediction 304 348 - -
Lele01g0339 797 MobiDBLite consensus disorder prediction 304 333 - -
Lele01g0339 797 MobiDBLite consensus disorder prediction 49 68 - -
Lele01g0339 797 Pfam Pleckstrin homology domain 91 211 - -
Lele01g0339 797 Coils Coil 285 305 - -
Lele01g0339 797 SUPERFAMILY Oxysterol-binding protein-like 416 793 IPR037239 -
Lele01g0339 797 Gene3D - 84 217 IPR011993 -
Lele01g0339 797 SUPERFAMILY PH domain-like 86 215 - -
Lele01g0339 797 MobiDBLite consensus disorder prediction 11 30 - -
Lele01g0339 797 Gene3D - 718 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0339 Lele-ChrLele01 1965346 1970947 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0339 01 1965346 1970947 Lele01g0339 01 1965346 1970947 ECH
Lele01g0339 01 1965346 1970947 Lele03g0348 03 1957965 1963463 hybridization
Lele01g0339 01 1965346 1970947 Lele04g0343 04 2011171 2016681 hybridization