Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0334 ATGCATCCCTTTTGCTGCGTCTCCGCCGTTTCTGATCAGTCTTCGCCTGTGAAACCCTCTCCCGCTCCCTTCCCTAGTTTCCATATGCATCCTCCTCTCCCCCTCGCCGCCCCTGCCTCTGCCATTCGATCCGATTCGATTCCCCGCGCCAATAACCACAACCACACCCATAGTAATCACGGCTTCGGCGAGTGTGGACGGCTGAGTCCGCTAGAGCAGCAGCAGCAACCGGCGGTGGATGTGAAGATCAATGACTTGGTTGGGTATGGAATCTCGGGGATACTGTATAAGTGGGTCAACTACGGTAAAGGCTGGAGACCTCGATGGTTCGTCCTTCAAGACGGCGTACTTTCTTACTATAAGATCCACGGGCCCGATAAGATCGTCGTCAATAAAGAAACCGAGAAGGGTTCTAAGGTCATTGGCGAAGAATCCATGCGAAGGATCACGCGCAACCGCAATTCTTATTCCCCGCATCAGCAGTCCCTCCATCGACGAAAGCCCTTTGGAGAAGTCCATCTCAAGGTTTCGACTATTCGCGAAAGCAGGTCAGATGATAAGCGGTTTTCCATTTTCACTGGAACTAAGAGACTCCACTTGAGGGCTGAGACCCGTGAAGATCGAGTGGCATGGGTGGAGGCATTGCAGGCAGTGAAAGATATGTTCCCGCGAATGTCCAACAGTGAGCTGATGGCTCCGTTAGACTATCTAACGATTTCAACTGACAAACTGAGACAACGGCTTCTGGAAGAAGGTGTAAGTGAGGAAGCCATCCAAGACAGTGAACAAATTATGAGAAGTCAATTTGTAGCACTACAAAATCAGCTTGTGCTGCTGAAGCAGAAGCAGTTGATTCTCATGGACACGCTACGACAGTTGGAGACAGAAAAAGTTGACCTGGAGAATACAGTTGTTGATGAGAGTCAAAGACAGTGGAATGATGAAGAGGCTTTTTCCAGATCAAAGCATGAAAAGTTTAGTGAAGGAAGTGCAAGTGAATCTGAGGATTATAATGAGAGAAATGATGCTGCAGAGGAAGAAACAGATGATGAAGACAATGCCTTTTTTGACACACGAGACTTTCTATCATCGAGTTCTTTTAAAAGTAATGGTTCTGATTATAGGTTTTCATCTTTCTCTTCGGACGATGAAGTACTTTATGCGATAGAGTCAGAGGAGGATGTAGATCCATCAATAGGATCAGTTAGAACCAGCTATCCCTATGTTAAACGGCGTAAGAAATTGCCTGACCCTATTGAAAAAGAGAAAGGCGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGAAAGGATCTAACAAAAGTATGTCTTCCTGTTTATTTCAACGAGCCTCTTTCGTCCTTGCAAAAATGTTTTGAAGAAATGGAGTACTCATATCTCTTGGATCGAGCATATGAATGGGGGAAAAGGGGTAATAGCCTTATGAGGATTCTTAACGTGGCTGCGTTTGCTGTATCTGGCTATGCCTCAACTGAAGGAAGAATTTGCAAACCATTTAATCCTTTACTAGGGGAAACATATGAGGCTGATTACCCAGATAAAGGACTTCGTTTTTTCTCAGAGAAGGTTAGTCATCACCCTATGATAGTTGCATGTCACTGTCAAGGCACAGGTTGGAAATTTTGGGGAGATAGCAACCTAAAGAGCAAATTTTGGGGCCGATCAATTCAGCTTGACCCTGTTGGTACTTTGACTTTGGAATTTGACGATGGGGAAGTTTTTCGGTGGAGTAAGGTGACAACGTCAATATACAATCTCATATTAGGGAAGCTGTACTGTGATCACTATGGAACAATGCGTATACAAGGAAACGGAGATTACTCATGTAAACTGAAATTCAAGGAGCAATCTATAATTGATCGAAATCCCCACCAGGTACACGGTATTGTTCAAGATAAGAATGGAAAAACAGTGGCAACTCTTTTCGGAAAATGGGATGAAAGTATGCATTATGTTTCTGGGGACTTTGCTGTGAAGGGAAAAGGTTACGACTCCTTGTCCGAAGCACGACTCCTGTGGAAGGGGAGCAAGCCCCCAAAGTTCCCTACTAGATATAATTTCACTCGCTTTGCCATCACATTAAATGAACTTACACCTGGATTGAAGGAAAAGCTGCCACCAACAGATTCCAGGTTGAGGCCAGACCAGAGGTATTTGGAAAATGGAGAGCATGAAATGGCGAATTCAGAAAAGTTGCGGCTAGAGCAGCGGCAACGCCAGGCTCGTAAGATGCAGGAGAGCGGTTGGCAACCGCGGTGGTTTGCCTTAGACAAAGCAAGCGGCAGTTACCGCTATTTGGGAGGGTACTGGGAAGCCAGGGAACGGGGAAATTGGGAATCTTGCCCTGACATTTTTGGTCAAATCCCCTCTGACCATCTTTCTGATTGA 2409 0.455 MHPFCCVSAVSDQSSPVKPSPAPFPSFHMHPPLPLAAPASAIRSDSIPRANNHNHTHSNHGFGECGRLSPLEQQQQPAVDVKINDLVGYGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNKETEKGSKVIGEESMRRITRNRNSYSPHQQSLHRRKPFGEVHLKVSTIRESRSDDKRFSIFTGTKRLHLRAETREDRVAWVEALQAVKDMFPRMSNSELMAPLDYLTISTDKLRQRLLEEGVSEEAIQDSEQIMRSQFVALQNQLVLLKQKQLILMDTLRQLETEKVDLENTVVDESQRQWNDEEAFSRSKHEKFSEGSASESEDYNERNDAAEEETDDEDNAFFDTRDFLSSSSFKSNGSDYRFSSFSSDDEVLYAIESEEDVDPSIGSVRTSYPYVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDRAYEWGKRGNSLMRILNVAAFAVSGYASTEGRICKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCQGTGWKFWGDSNLKSKFWGRSIQLDPVGTLTLEFDDGEVFRWSKVTTSIYNLILGKLYCDHYGTMRIQGNGDYSCKLKFKEQSIIDRNPHQVHGIVQDKNGKTVATLFGKWDESMHYVSGDFAVKGKGYDSLSEARLLWKGSKPPKFPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEHEMANSEKLRLEQRQRQARKMQESGWQPRWFALDKASGSYRYLGGYWEARERGNWESCPDIFGQIPSDHLSD 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0334 802 MobiDBLite consensus disorder prediction 311 338 - -
Lele02g0334 802 CDD PH_ORP_plant 91 227 - -
Lele02g0334 802 SUPERFAMILY Oxysterol-binding protein-like 421 798 IPR037239 -
Lele02g0334 802 SMART PH_update 89 222 IPR001849 -
Lele02g0334 802 FunFam Oxysterol-binding protein-related protein 2A 723 794 - -
Lele02g0334 802 Gene3D - 512 683 - -
Lele02g0334 802 SUPERFAMILY PH domain-like 91 220 - -
Lele02g0334 802 MobiDBLite consensus disorder prediction 311 352 - -
Lele02g0334 802 Coils Coil 290 310 - -
Lele02g0334 802 ProSiteProfiles PH domain profile. 88 220 IPR001849 -
Lele02g0334 802 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 90 780 IPR000648 GO:0008289
Lele02g0334 802 MobiDBLite consensus disorder prediction 46 67 - -
Lele02g0334 802 Coils Coil 334 354 - -
Lele02g0334 802 Pfam Pleckstrin homology domain 96 216 - -
Lele02g0334 802 Gene3D - 723 783 - -
Lele02g0334 802 FunFam oxysterol-binding protein-related protein 1D isoform X1 512 684 - -
Lele02g0334 802 Pfam Oxysterol-binding protein 426 781 IPR000648 GO:0008289
Lele02g0334 802 Gene3D - 90 222 IPR011993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0334 Lele-ChrLele02 1893558 1899030 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0334 02 1893558 1899030 Lele02g0334 02 1893558 1899030 ECH
Lele02g0334 02 1893558 1899030 Lele03g0348 03 1957965 1963463 hybridization
Lele02g0334 02 1893558 1899030 Lele04g0343 04 2011171 2016681 hybridization