Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0270 ATGAACCCCAAAGGAGTGAAGCCAAGGCCTGTGGAACCACAACTGAAAGTGAAGAGCAAAAACATGAGTAGGGAATCTGGAGGACAGTGGCTTAGCTGCGCTACACGCCATGTCAGGATCTATGCTGCATATATCGACCCTGTCACCTGGGAGTTTGATCAGACCCAGATGGATAAGCTCACCCTTATCCTCGATCCCACCGATGAGTTCGGGTGGAATCCTGATACTTGCAATAAGGTTTTCTCTTACTTCCAGGAGCTTGTCGATCATTACGAGGGTACTCCTTCGACGGAATACACGCTTCGCCTGATTGGTTCAGACATAGAGCACTACATAAGGAAACTGCTGTACGATGGGGAAATCAAGTACAACATGAACTCAAAGGTGCTCAATTGCAGCATGGGAAAGCCTCGCATTATGTTCAATAATAATGATCTTCCACCTCAAGAGGCGCTTGAGTAA 462 0.4719 MNPKGVKPRPVEPQLKVKSKNMSRESGGQWLSCATRHVRIYAAYIDPVTWEFDQTQMDKLTLILDPTDEFGWNPDTCNKVFSYFQELVDHYEGTPSTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNSKVLNCSMGKPRIMFNNNDLPPQEALE 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0270 153 Pfam Cyanobacterial and plastid NDH-1 subunit M 31 139 IPR018922 GO:0016655
Lele04g0270 153 MobiDBLite consensus disorder prediction 1 23 - -
Lele04g0270 153 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 4 150 IPR018922 GO:0016655
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0270 Lele-ChrLele04 1598254 1598930 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0270 04 1598254 1598930 Lele04g0270 04 1598254 1598930 ECH
Lele01g0278 01 1560756 1561626 Lele04g0270 04 1598254 1598930 hybridization
Lele02g0264 02 1500999 1507137 Lele04g0270 04 1598254 1598930 hybridization