Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0264 ATGGTTCAATACAATCTGCATTTTGACAGGCTTTTTGCTGGTTTGAACTGGGTCCTCTTTTTGCCAGATACAAATGGACTTACTTCTATTCAGGGTCGGTTGCAATTCCTGAGTGCCACCAAGCAGTACCATGTTAACTCTGTTGCTGTGCTTCGGAAAGCAAAAGAAGCTATTGGAGGGATTACCAGACTCACTCAATCTGATGCATTTGATTATCAATATGAAAGACATTATCTCAAGGAGGGCAATGGTGATAAATGTGGAGTACAATCAACTAGATCCTCTCCTCGAGGCAACTGGACACCCTCAAGATACAAAGATGCCAGTAAAACTTCATTTAAGTCCTCAACTCGACTAGAATGCATGATGCAAGACAATCCCAAAACATTGCCCCCATCTGCAAGAGTTGGCTTGGATTCATGGCTTGCTTATGCACCCGTAAAGAACAACCCGGAAGATGCTGCTAAGGCCGGTGTCGAAGTAGCAGGTCCAGAATTGCAGGTTATTAATGGGCAAGAGGTGGAAGTGTGGCCTCGTATCACATGGAAACCAAAACGGGGTCTGACTTTCTCTCAAATTAAGAAAAGAGTCGGTGGAAGTTGCTCCATTTCTCAAAGGTCTACATCGGTAATTAAGGGTAACAAAGTCAATCTAAAGAACCTGTCCTTAGATGGGGCTCTTGTCGTTGATGCTGTTGACGATGCAGAGGTGGACGGGGTTGGTTCTGTCAAAAACAAAGGTTGGACCCTCGAAACTGTGGACTACAAGAATACCTCGGAGCCTGAAAAGGGACTCGAGAAACAGGAAAGCATTTTCCTTTTCGGCTCAACAGCAAGCAGAAGTCGAGGAGGAAGTGAAAGTACAGCAAGAACAGGCACAAGCACAATCAAACCCTGGCACTCAGAATATGGACCCCAAAGGAGTGAAACCAAGGCCTGTGGAACCACAAGTGACGTGAAGAGCAAAAACATGAGTACGGAATATGGAGGACAGTGGCTTAGCTGCGCTACCCGCCATGTCAGGATCTATGCTGCATATATCGACCCTGTCACCTGGGAGTTTGATCAGACCCAGATGGATAAGCTCACCCTTATCCTCGATCCCACCGATGAGTTCGGGTGGAATCCTGATACTTGCAATAAGGTTTTCTCTTACTTCCAGGAGCTTGTCGATCATTACGAGGTGCTCAATTTCAGCATGGGCAAGCCTCGCATTATGGTCAATAACAATGATCTTCCACCTCAAGAGGCGCTTGAGTAA 1260 0.4603 MVQYNLHFDRLFAGLNWVLFLPDTNGLTSIQGRLQFLSATKQYHVNSVAVLRKAKEAIGGITRLTQSDAFDYQYERHYLKEGNGDKCGVQSTRSSPRGNWTPSRYKDASKTSFKSSTRLECMMQDNPKTLPPSARVGLDSWLAYAPVKNNPEDAAKAGVEVAGPELQVINGQEVEVWPRITWKPKRGLTFSQIKKRVGGSCSISQRSTSVIKGNKVNLKNLSLDGALVVDAVDDAEVDGVGSVKNKGWTLETVDYKNTSEPEKGLEKQESIFLFGSTASRSRGGSESTARTGTSTIKPWHSEYGPQRSETKACGTTSDVKSKNMSTEYGGQWLSCATRHVRIYAAYIDPVTWEFDQTQMDKLTLILDPTDEFGWNPDTCNKVFSYFQELVDHYEVLNFSMGKPRIMVNNNDLPPQEALE 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0264 419 MobiDBLite consensus disorder prediction 278 318 - -
Lele02g0264 419 Pfam Cyanobacterial and plastid NDH-1 subunit M 333 394 IPR018922 GO:0016655
Lele02g0264 419 FunFam UDP-sugar pyrophosphorylase 159 265 - -
Lele02g0264 419 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 299 394 IPR018922 GO:0016655
Lele02g0264 419 MobiDBLite consensus disorder prediction 85 112 - -
Lele02g0264 419 SUPERFAMILY Nucleotide-diphospho-sugar transferases 14 231 IPR029044 -
Lele02g0264 419 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 5 162 IPR029044 -
Lele02g0264 419 MobiDBLite consensus disorder prediction 87 112 - -
Lele02g0264 419 MobiDBLite consensus disorder prediction 278 301 - -
Lele02g0264 419 Gene3D - 163 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0264 Lele-ChrLele02 1500999 1507137 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0264 02 1500999 1507137 Lele02g0264 02 1500999 1507137 ECH
Lele02g0264 02 1500999 1507137 Lele03g0283 03 1555845 1556711 hybridization
Lele02g0264 02 1500999 1507137 Lele04g0270 04 1598254 1598930 hybridization