Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0278 ATGGCCACAAGTTTCTCCAGCGCGCTTTCGACCAAATTACCCATGATGGGTTTCAGTGGCTGCAGAAGGGACTCGAGAAACAGGAAAGCATTTTCCATTTCAGCTCAACAGCAAGCGGAAGTCGAGGAGGAAGTAAAAGTACAGCAAGAACAGGCACAAGCACAATCAAACACAGGCACTCAGAATATGAACCCCAAAGGAGTGAAACCAAGGCCTGTGGAACCACAAGTGAACGTGAAGAGCAAAAACATGAGCAGGGAATATGGAGGACAGTGGCTTAGCTGCGCTACCCGCCATGTGAGGATCTATGCTGCATATATCGACCCTGTCACCTGGGAGTTTGATCAGACCCAGATGGATAAGCTCACCCTTATCCTCGATCCCACCGATGAGTTCGTGTGGAATCCTGATACTTGCAATAAAGTTTTCTCTTACTTCCAGGAGCTTGTCGATCATTACGAGGGTGCTCCTTTAACGGAATACACGCTTCGCCTGATTGGTTCAGACATAGAGCACTACATAAGGAAACTACTGTACGATGGGGAAATCAAGTACAACATGAACTCAAAGGTGCTCAATTTCAGCATGGGCAAGCCGCGCATTATGTTCAATAATAATGATCTTCCACCTCAAGAGGCACTTGAGTAA 648 0.4691 MATSFSSALSTKLPMMGFSGCRRDSRNRKAFSISAQQQAEVEEEVKVQQEQAQAQSNTGTQNMNPKGVKPRPVEPQVNVKSKNMSREYGGQWLSCATRHVRIYAAYIDPVTWEFDQTQMDKLTLILDPTDEFVWNPDTCNKVFSYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKLLYDGEIKYNMNSKVLNFSMGKPRIMFNNNDLPPQEALE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0278 215 Pfam Cyanobacterial and plastid NDH-1 subunit M 93 201 IPR018922 GO:0016655
Lele01g0278 215 MobiDBLite consensus disorder prediction 30 74 - -
Lele01g0278 215 MobiDBLite consensus disorder prediction 30 65 - -
Lele01g0278 215 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT M, CHLOROPLASTIC 1 212 IPR018922 GO:0016655
Lele01g0278 215 Coils Coil 38 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0278 Lele-ChrLele01 1560756 1561626 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0278 01 1560756 1561626 Lele01g0278 01 1560756 1561626 ECH
Lele01g0278 01 1560756 1561626 Lele03g0283 03 1555845 1556711 hybridization
Lele01g0278 01 1560756 1561626 Lele04g0270 04 1598254 1598930 hybridization