Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0241 ATGGCAACAGTTGTGTTCATAAACTGTGCTTTTCCTTGGAGTAATTCAAAGCTTATTCTAACCCCTCCTTCACAAACTTCATCAGAAAATGAAGCTCTAAGAACTAGAGCTGCTTCGGGTTCGAAAGGAGCTGACTTTGTTAACGGAGAAAGCGAGAAGCGCTCAACTTTACTGTTGAACAGAAGAACAATTTTGGCTTCTGCGGTTTCCGTACTGGGTTTTCCGAGAGACAGTTTAGCGGCGGTGAAACAAGGTTTGCTAGCAGGAAGGATCCCTGGTCTATCCGAGCCTGATGAACAAGGTTGGAGAACATATCGCAGGCCAGATGAAAAGTCTGGAGGACATGGAGTTGGATGGAGTCCTATTATCCCTTACAAGTTCTCAGTGCCTCAAGACTGGGGAGAGGTACCAGTATCAATAGCAGATCTTGGTGGTACAGAGATAGATTTGAGATTCGCAAGCTCAAGGGAAGGACGCTTGTTTGTCATTGTTGCTCCTGTTCTGAGATTTGCTGATAATCTTGGTGATGATGCTACAATAGAAAAAATAGGCCCTCCCGAAACAGTGATCAATGCGTTTGGCCCAGAAGTAATTGGGGAGAATGTGGAAGGGAAAGTTCTTGGTTACAATGTAGCGGAACATGAAGGAAGAACATACTACCAATTTGAACTAGAGCCTCCTCATGTACTTATTACAGCTACTGCAGCCGGCAACCGCCTGTACTTGTTCAATGTGACTGGCAGTGGTCTCCAATGGAAGAGGCATTACGATGATCTGAAGAGAATATCAAGTTCTTTTCGTGTTGTTTGA 810 0.4457 MATVVFINCAFPWSNSKLILTPPSQTSSENEALRTRAASGSKGADFVNGESEKRSTLLLNRRTILASAVSVLGFPRDSLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYKFSVPQDWGEVPVSIADLGGTEIDLRFASSREGRLFVIVAPVLRFADNLGDDATIEKIGPPETVINAFGPEVIGENVEGKVLGYNVAEHEGRTYYQFELEPPHVLITATAAGNRLYLFNVTGSGLQWKRHYDDLKRISSSFRVV 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0241 269 PANTHER - 26 268 - -
Lele04g0241 269 Pfam PsbP 125 268 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele04g0241 269 MobiDBLite consensus disorder prediction 22 48 - -
Lele04g0241 269 SUPERFAMILY Mog1p/PsbP-like 117 268 IPR016123 -
Lele04g0241 269 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 121 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0241 Lele-ChrLele04 1428909 1430813 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0241 04 1428909 1430813 Lele04g0241 04 1428909 1430813 ECH
Lele01g0241 01 1376000 1378032 Lele04g0241 04 1428909 1430813 hybridization
Lele02g0235 02 1329792 1331828 Lele04g0241 04 1428909 1430813 hybridization