Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0241 ATGGCCACAGTTCTGTTCATAAACTGTGCTTTTTCTTGGAGTAATTCAAAGCTTATGCTAACCCCTCCTTCTTCACCTTCAATGGGTTGCTCTTCATCAGAAAATGAAGCTCTAAGAACTAGAGCTGCTTCGGGTCCGAAAGGAACTGACTTTGTTAACGGAGAAAGCGAGAAGCGTTCAACTTTACTGTTGAATAGAAGAACAATTTTGGCTTCTGCGGTTTCCGTACTGGGTTTTCCGAGGGACAGTTTAGCGGCGGTGAAACAAGGTCTGCTAGCAGGAAGGATACCTGGTCTATCTGAGCCTGATGAACAAGGTTGGAGGACATATCGCAGGCCAGATGAAAAGTCTGGAGGACATGGAGTTGGATGGAGTCCTATTATCCCTTACAAATTTTCAGTGCCTCAAGACTGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGTACAGAGATAGATTTGAGATTTGCAAGCTCAAGGGAAGGACGCTTGTTTGTCATTGTTGCTCCTGTTCTGAGATTTGCTGATAATCTTGGCGAGGATGCCACAATAGAAAAAATAGGCCCTCCCGAAACAGTGATCAATGCGTTTGGTCCAGAAGTGATTGGGGAGAATGTGGAAGGGAAAGTTCTCAGTTACAATGTATCGGAACATGAAGGAAGAACATACTACCAATTTGAACTAGAGCCTCCTCATGTGCTTATTACAGCTACTGCAGCCGGCAACCGCCTGTACTTGTTCAATGTGACTGGCAGTGGTCTCCAGTGGAAAAGGCATTACGATGATCTTAAGAGAATATCGAGTTCTTTTCGGGTTGTTTGA 825 0.4473 MATVLFINCAFSWSNSKLMLTPPSSPSMGCSSSENEALRTRAASGPKGTDFVNGESEKRSTLLLNRRTILASAVSVLGFPRDSLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYKFSVPQDWEEVPVSIADLGGTEIDLRFASSREGRLFVIVAPVLRFADNLGEDATIEKIGPPETVINAFGPEVIGENVEGKVLSYNVSEHEGRTYYQFELEPPHVLITATAAGNRLYLFNVTGSGLQWKRHYDDLKRISSSFRVV 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0241 274 MobiDBLite consensus disorder prediction 27 56 - -
Lele01g0241 274 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 127 274 - -
Lele01g0241 274 PANTHER - 23 273 - -
Lele01g0241 274 SUPERFAMILY Mog1p/PsbP-like 122 273 IPR016123 -
Lele01g0241 274 Pfam PsbP 130 273 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0241 Lele-ChrLele01 1376000 1378032 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0241 01 1376000 1378032 Lele01g0241 01 1376000 1378032 ECH
Lele01g0241 01 1376000 1378032 Lele03g0248 03 1357686 1359717 hybridization
Lele01g0241 01 1376000 1378032 Lele04g0241 04 1428909 1430813 hybridization