Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0235 ATGAGCACGTCCACAAAATTTCTAGCCTCGGGTATCTCGGCTTCTACACCATTCTTCCTCTCTGCTGATAATTATGCTGTTTCTCCTCCATCCTTAATCACTACTCGCCCAACGCATCGCAGACATGGCAACAAAAATGAAGCTCTAAGAACTAGAGCTGCTTCGGGTTCGAAAGGAGCTGACTTTGTTAACGGAGAAAGCGAGAAGAGTTCAACTTTACTGTTGAACAGAAGAACAATTTTGGCTTCTGCGGTTTCCGTACTGGGTTTTCCGAGGGACAGTTTAGCGGCGGTGAAACAAGGTTTGCTAGCAGGAAGGATCCCTGGTCTATCCGAGCCAGATGAACAAGGTTGGAGGACATATCGCAGGCCAGATGAAAAGTCTGGAGGACATGGAGTTGGATGGAGTCCTATTATCCCTTACAAGTTCTCAGTGCCTCAAGACTGGGAAGAGGTACCAGTATCAATAGCAGATCTTGGTGGTACAGAGATAGATTTGAGATTCGCAAGCTCAAGGGAAGGACGCTTGTTTGTCATTGTTGCTCCTGTTCTGAGATTCGCTGATAATCTTGGTGATGATACTACAGTAGAAAAAATAGGCCCTCCCGAAACAGTGATCAATGCGTTTGGTCCAGAAGTGATTGGGGAGAATGTGGAAGGGAAAGTTCTTGGTTACAATGTAGCGGAACATGAAGGAAGAACATACTACCAATTTGAACTAGAGCCTCCTCATGTACTTATTACAGCTACTGCAGCCGGCAACCGCCTGTACTTGTTCAATGTGACTGGCAGTGGTCTCCAATGGAAGAGGCATTACGATGATCTGAAGAGAATATCAAGTTCTTTTCGTGTTGTTTGA 858 0.4557 MSTSTKFLASGISASTPFFLSADNYAVSPPSLITTRPTHRRHGNKNEALRTRAASGSKGADFVNGESEKSSTLLLNRRTILASAVSVLGFPRDSLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYKFSVPQDWEEVPVSIADLGGTEIDLRFASSREGRLFVIVAPVLRFADNLGDDTTVEKIGPPETVINAFGPEVIGENVEGKVLGYNVAEHEGRTYYQFELEPPHVLITATAAGNRLYLFNVTGSGLQWKRHYDDLKRISSSFRVV 285
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0235 285 Gene3D Mog1/PsbP, alpha/beta/alpha sandwich 138 285 - -
Lele02g0235 285 PANTHER - 33 284 - -
Lele02g0235 285 Pfam PsbP 141 284 IPR002683 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Lele02g0235 285 SUPERFAMILY Mog1p/PsbP-like 133 284 IPR016123 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele02g0235 Lele-ChrLele02 1329792 1331828 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0235 02 1329792 1331828 Lele02g0235 02 1329792 1331828 ECH
Lele02g0235 02 1329792 1331828 Lele03g0248 03 1357686 1359717 hybridization
Lele02g0235 02 1329792 1331828 Lele04g0241 04 1428909 1430813 hybridization