Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g1422 ATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGCCCTTCCAAGGCCTTTCTCGCTCACCGCTCCGGCGAATCTCCCGCTCCCCCTCAGCCCGACCTCCGCCGCAGCCTTCGCCGACGAAATGTGAGGTACAACATCGAGTTTGACGACTACCTCGACGAGGACGACGAGGACGAGGACGACGATGAGAGGAGGAGGGAGAAGAAGCTTAAGCTAGTTGTGAAGCTGAACCAGGATAGGGATAGGGACGAAGAAGAGTCGGCGCCCAGCCGCACGCGCGGCGGGGCGCGTGGGAGTCACTCACGGGATTCTTCGGAGGAGGACGAGGGCGAGAGGAAGCCCCTGAAGAAGAGAAGGATCAGCGGCGGCAGGATTGGGAATGAAGACGGCGAGGAGGAGGAGGAAGAAGAAGGTGGGGAAGATAATGATGAAGAAAACGAAAACGAGGAAGAAGAGAATCTCCGAGACCATAATGATGATGATGATGATGATGGTGTGGTAAAAGGCAGAAAAGCGGATTCGAAAGGGCTCCACCCTGTTTCAGTGACTCCAAGAAAATCTTCATCTGGAATTCCGTTGCCTGATAAGAGGACATTAGAGTTGATCCTTGACAAACTTCAAAAGAAGGATACATATGGCGTTTATGCGGAGCCTGTTGATCCGGAAGAGCTTCCTGATTATCATGATGTGATTGATCATCCAATGGACTTTGCCACAGTGCGAAAGAAGCTAGCTAGTGGATCATATCCTACCTTGGAACAATTTGAGAGTGATGTATTTTTAATATGTACCAATGCAATGCAATACAATTCACCGGAAACTATATACCACAAACAGGCACGATCAATACAAGAATTAGCACGGAAGAAATTTGAGAAGTTAAGGGTTGACTTTGGACACTCACAAAGTGAGCAGAAATCAGATCAAAAAGCAAGATCAAATTCCTTGGGCAAGAAGCTCACAAAGAAGCCCGTTGGTCATGCCTCACAGGAACCTGTTGGCTCTGATTTCTCAGCGGGTGCAACTCTTGCTAACATTGGAGATGTACTGCCAACTTCCCACCCTATCCCAGGTGGCAGCTGTGAGAGGCCTTGCCACAATGATGGCCTTCCCGATGTTAATGGTTTCATAATTGATGCAAATCAAGAAAAAGCAGAAGACTTTTTATCAGGGAAGAGCCTGCTCTCTAAGTTGGGAAGAAAGCCATTTGCTCTTGATGATAATCGTCGTGGAACTTATAATGCTTCTATTCAACCAGTTGCCAGATCAGATTCTGTTCTCATGACATTTGAGAGTGAAATTAAGCAGCTGGTTACCGTTGGTCTTCATGCTGACCATTCCTATTCTAGGAGTTTAGCTCGTTTCGCTGCAACTTTAGGGCCTGTTGCTTGGAGAATTGCTTCCCGGAGAATTCAGCAGGCACTTCCAAGCGGCTGCAAATTTGGACGTGGTTGGGTTGGAGAGTATGAACCACTTCCAACACCATTAATAATGCTTGATCATCGAATCCATAAAGAACCCAGCTTTGTTTCAAAGTTGCAGTCTACTGAATCTGGAAAGGGTGACAAAAATGGCAAGACTTCTGAATCCCCCGTGGATAACAATGTCCATGGACTCATGTCAGAGGGGAAACAGCCTTTGACTGATCCTGCTAGTAGACCTTCCTCAGAAGGAAAACCATCTCTGTTTGGCTCTGCTGGAATAAGACCCAATGCTCCAGTAAATGCTCTGGTCAATGTCCTTTATCAACAACAGAATGTTCAACCCAGGAGTTCTGGCAAGCCTGAGAAGAAGGGTTTGAAACAGGTGGAGTTGAACTCTTTACCCTCAAGTAATCAGAATAATGTCAACCTTAGCGCAAAGTTTTTAAGTAATGCTCCTCCAGGAGTGTCTAAGCCTAGAGAAATGGTGCCTAGGAACATTAATATATCACCACCTGTACCTTTCAAGGAGCCAGATACTAATGGAGTTGCAAGCGGAGATTTACCTAATGGAAAAGTCCCAAATTCTGGTCTGAATAGACGGCCAACTGGATCACCCTCTGAAAGTACATCAAATCAAAGTGGTAGAGCTGGTCCTTTTGTGCCCCCTGGGCAAGATCAGAGTCTTACTGACCCAGTTCAGCTGATGAGGATGTTAGCTGAAAAGGCTCAGAAGCAACAAGCTTCTTCTAATCCTTCTCCCGTTGATACTCCTCCTATGACACCGTCGGTTTCATCAGGACGGAGGGATGACTTGGGCAATGCTGCTGCAGCAGCTGCCCGTGCATGGATGTCCGTGGGAGCGGGAGGATTTAAGCAAGGAACTGATAATTCTAGTTCACCCAAAAACCAGATTTCTGCCGATTCTTTATACAACCCATCCCGAGAGTTCCATCAACATATTCCGCCAACAAGGGGGGAGTTCCCTTCCCCTTCTGGCGGAATGCCTTTCCAGCCCGAGAAGAACAATTTTCCATTTCAGGCACTAGTATCTCAACCAATTCACCCGGGCAGCGTTTTGCAGTTTCCAAACCGACCTAGGGTTTTCCCTCAATTATCAGCCACTGATCTATCCAGATTTCAAATGCAGTCTACTTGGCAAGGTCTCAGTCCACATGGCCAACCGAGACAAAAACCAGAAACACTCCCTCCCGACTTGAATATCGGCTTCCAATCTCCAGGGTCACCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCCCAGCAACCAGACCTGGCCTTACAACTATGA 2733 0.4753 MGQIVRRKKKGRPSKAFLAHRSGESPAPPQPDLRRSLRRRNVRYNIEFDDYLDEDDEDEDDDERRREKKLKLVVKLNQDRDRDEEESAPSRTRGGARGSHSRDSSEEDEGERKPLKKRRISGGRIGNEDGEEEEEEEGGEDNDEENENEEEENLRDHNDDDDDDGVVKGRKADSKGLHPVSVTPRKSSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIDHPMDFATVRKKLASGSYPTLEQFESDVFLICTNAMQYNSPETIYHKQARSIQELARKKFEKLRVDFGHSQSEQKSDQKARSNSLGKKLTKKPVGHASQEPVGSDFSAGATLANIGDVLPTSHPIPGGSCERPCHNDGLPDVNGFIIDANQEKAEDFLSGKSLLSKLGRKPFALDDNRRGTYNASIQPVARSDSVLMTFESEIKQLVTVGLHADHSYSRSLARFAATLGPVAWRIASRRIQQALPSGCKFGRGWVGEYEPLPTPLIMLDHRIHKEPSFVSKLQSTESGKGDKNGKTSESPVDNNVHGLMSEGKQPLTDPASRPSSEGKPSLFGSAGIRPNAPVNALVNVLYQQQNVQPRSSGKPEKKGLKQVELNSLPSSNQNNVNLSAKFLSNAPPGVSKPREMVPRNINISPPVPFKEPDTNGVASGDLPNGKVPNSGLNRRPTGSPSESTSNQSGRAGPFVPPGQDQSLTDPVQLMRMLAEKAQKQQASSNPSPVDTPPMTPSVSSGRRDDLGNAAAAAARAWMSVGAGGFKQGTDNSSSPKNQISADSLYNPSREFHQHIPPTRGEFPSPSGGMPFQPEKNNFPFQALVSQPIHPGSVLQFPNRPRVFPQLSATDLSRFQMQSTWQGLSPHGQPRQKPETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g1422 910 MobiDBLite consensus disorder prediction 1 193 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 297 315 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 860 910 - -
Lele03g1422 910 Pfam Bromodomain 201 281 IPR001487 GO:0005515
Lele03g1422 910 MobiDBLite consensus disorder prediction 670 692 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 128 159 - -
Lele03g1422 910 SMART bromo_6 188 296 IPR001487 GO:0005515
Lele03g1422 910 MobiDBLite consensus disorder prediction 297 336 - -
Lele03g1422 910 ProSitePatterns Bromodomain signature. 213 269 IPR018359 -
Lele03g1422 910 PRINTS Bromodomain signature 240 258 IPR001487 GO:0005515
Lele03g1422 910 PRINTS Bromodomain signature 224 240 IPR001487 GO:0005515
Lele03g1422 910 PRINTS Bromodomain signature 258 277 IPR001487 GO:0005515
Lele03g1422 910 CDD Bromodomain 195 291 - -
Lele03g1422 910 ProSiteProfiles Bromodomain profile. 207 277 IPR001487 GO:0005515
Lele03g1422 910 MobiDBLite consensus disorder prediction 160 175 - -
Lele03g1422 910 PANTHER BROMODOMAIN CONTAINING PROTEIN 6 909 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 789 816 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 715 750 - -
Lele03g1422 910 SUPERFAMILY Bromodomain 178 294 IPR036427 GO:0005515
Lele03g1422 910 MobiDBLite consensus disorder prediction 509 567 - -
Lele03g1422 910 Gene3D - 194 315 IPR036427 GO:0005515
Lele03g1422 910 MobiDBLite consensus disorder prediction 33 48 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 717 742 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 1 16 - -
Lele03g1422 910 Coils Coil 140 160 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 886 910 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 62 127 - -
Lele03g1422 910 MobiDBLite consensus disorder prediction 623 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g1422 Lele-ChrLele03 8625196 8630101 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g1422 03 8625196 8630101 Lele03g1422 03 8625196 8630101 ECH
Lele01g1419 01 8726687 8736326 Lele03g1422 03 8625196 8630101 hybridization
Lele02g1707 02 20628215 20633057 Lele03g1422 03 8625196 8630101 hybridization