Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0963 ATGGCCTCTCTCCTTCTTGCTCCTTTTCTCTTTCACATTCTCCTTCTTGCCACCGTACCATCTCTCGCTGACGCCGGCAACGGACAATGGCAGCTCCTACAGAACAGCATTGGCATTGTGGCCATGCACATGCAGTTACTCCACCACGACCGTGTCGTCATCTTCGACCGCACCGACTTTGGCCTCTCTAACTTATCCTTGCCCAATGGCAGATGCCGCCAAAATCCCAAAGAGCTGGTCGTCAAAACAGACTGCACAGCTCACGCCCTCGAGTACGACGTGGCTTCCAACTCCTTCCGCCCCCTCTTTGTCCACACTAACGTCTGGTGTTCCTCCGGCTCCGTCGCTCCCGACGGCCGTCTCATCCAGACCGGTGGCTTCAATGACGGAGATCGTACTGTCAGGATGATCAGTCCTTGCCCCGACTGTGATTGGGAAGAAGTAGACGGTGGATTGGCTGAGCGAAGGTGGTACGCCACCAATCACATTCTTTCAGACGGACGTCAGATTATAGTTGGTGGCAGAAGAACGTTCAACTACGAGTTTTATCCTAAAACAGACGCAAGAAATAGTTACAGTCTACCGTTTCTTGTGCAGACCAATGATGCAGGCATAGAGAACAACTTGTACCCCTTTATTTTTTTGAACGTGGATGGCAACATGTTCATCTTCGCCAACAATCGAGCCATCTTACTGGACTTCGACAAGAACAAGGTGGTCAGGACCTACCCGCAAATACCAGGTGGAGATCCCAGATCATATCCTAGTACAGGCTCGGCAGTGTTATTACCTTTGAAGAATCTACAGGCCAAGACGGTGGAAGCGGAGGTTCTGATCTGTGGTGGAGCCCCGAGAGGGTCGTATGAGCAGGCCAACCAAGGCAAATTTCTCCCAGCTTTGAATACCTGTGCTCGGATCAAGATCACTGACCCGAACCCACAGTGGGTCATGGAGACAATGCCCGGATCTAGAGTTATGAATGACATGGTAATGCTTCCTGATGGTAATGTTTTGATCATCAATGGAGCAGCTTCGGGTACGGCCGGATGGGAAGCGGGTCGCAACCCGGTGTTAAACCCGTTTCTGTATAAAACAAACAGCCCAGTGGGGTCTCGGTTCGAATTGCAAAACCCGAGTAATATTCCACGGATGTATCACTCGACGGCTGCTCTGCTTCGCGACGGACGCGTGCTTGTCGCCGGAAGCAATCCTCACGTATACTACAATTTCACCAATGTCTTATTTCCAACGGAGTTCAGATTGGAGGCGTTTTCCCCATCGTATTTAGAGTCTGCATTCTCTAATGTGCGTCCCAAAATTGTGTCTCCCCCTTCTGAGGCGAAGCTCAAGTATGGTGAGAAGGTGAAGCTGAGGTTCCAGGTGACAGCAACATTAGTTACAAATATGGTGTCGGTGACGATGTTGTTGCCGCCATTTAATACACACTCGTTCTCCATGAATCAGAGGATGTTGGTGCTGGAGCCCACAAAAGTGACGAATCAGGGAAGATCTGCGTATGAAGTTGAGGTCACCACGCCACCTTCGCCCATTCTTGCACCTCCTGGTTACTATATGCTATTTGTGGTCCATCAAGAAATCCCAAGCAACGGTATCTGGGTGCAACTAATATAA 1632 0.5031 MASLLLAPFLFHILLLATVPSLADAGNGQWQLLQNSIGIVAMHMQLLHHDRVVIFDRTDFGLSNLSLPNGRCRQNPKELVVKTDCTAHALEYDVASNSFRPLFVHTNVWCSSGSVAPDGRLIQTGGFNDGDRTVRMISPCPDCDWEEVDGGLAERRWYATNHILSDGRQIIVGGRRTFNYEFYPKTDARNSYSLPFLVQTNDAGIENNLYPFIFLNVDGNMFIFANNRAILLDFDKNKVVRTYPQIPGGDPRSYPSTGSAVLLPLKNLQAKTVEAEVLICGGAPRGSYEQANQGKFLPALNTCARIKITDPNPQWVMETMPGSRVMNDMVMLPDGNVLIINGAASGTAGWEAGRNPVLNPFLYKTNSPVGSRFELQNPSNIPRMYHSTAALLRDGRVLVAGSNPHVYYNFTNVLFPTEFRLEAFSPSYLESAFSNVRPKIVSPPSEAKLKYGEKVKLRFQVTATLVTNMVSVTMLLPPFNTHSFSMNQRMLVLEPTKVTNQGRSAYEVEVTTPPSPILAPPGYYMLFVVHQEIPSNGIWVQLI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0963 543 SUPERFAMILY Galactose oxidase, central domain 90 430 IPR011043 -
Lele03g0963 543 PANTHER SECRETED PROTEIN-RELATED 16 542 - -
Lele03g0963 543 FunFam Aldehyde oxidase GLOX 24 435 - -
Lele03g0963 543 Gene3D Immunoglobulins 436 543 IPR013783 -
Lele03g0963 543 Gene3D - 24 433 IPR037293 -
Lele03g0963 543 Pfam Glyoxal oxidase N-terminus 42 282 IPR009880 -
Lele03g0963 543 CDD E_set_GO_C 433 542 IPR015202 -
Lele03g0963 543 SUPERFAMILY E set domains 433 542 IPR014756 -
Lele03g0963 543 Pfam Galactose oxidase-like, Early set domain 437 541 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0963 Lele-ChrLele03 5609117 5610748 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0963 03 5609117 5610748 Lele03g0963 03 5609117 5610748 ECH
Lele01g0966 01 5589396 5591030 Lele03g0963 03 5609117 5610748 hybridization
Lele02g0969 02 5892073 5893492 Lele03g0963 03 5609117 5610748 hybridization