Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0769 ATGTATTTCTCGTTCACTTGGGACCGTTATGATGCTGAAGAATTGGATGCTGAGTCTGCAGGGGTCTCTCTTGATAGTTCCAGTAAAACATCTGATGTTATTGTGCCGAAAAGTAAAGGGGCGGATTATCGCCATCTGCTTGCTGAGGCTCAGTCTCAAGAAAATGCCAGTTTGGATGGCGTTCTTTTTGGGTTTCTTCCACTCAATCTTCCAAGAAACCTAATGGCCGACGAAGCACAATATTCATCGAGCGCAGATAACACGTCCCACAAGCGCAAGTATGAAGAACCACCACTTTCTCAATCAACTCACAGGCCTACTGGATTCTCTGCGCCTATCGCGTCTACATCTCCCGATAGTTCTCACGCTCCGCCTCCCTCCTATAACAGCGTCCCGCCTCCGGCGGCAACTGGTATCGAGCTGGCCAAGCAACGAGCTCAGGAGGTTGCTGCTCGCCTCTTAAACAGCAGTGGAGCAACTGGGTTGGATGCCAAGCGTTCCAAGTTCGAGAACGGTGCTTCAGGATTTGATTCCAACGATGCGAAGCCCCAGTACTCAGTCCCATCAGCAGCTCCCATTTCTTATGCCTATCAGGGTTCTAGCAAAAAGATAGACATTCCGAATGGAAGGGTCGGCGTTATTATTGGTAAAGGTGGGGAGACAATCAAGTATCTTCAAACTCAGTCTGGAGCGAAGATCCAAGTTACCCGTGATATGGATTCAGACCCAAATTCTCTAACAAGGACGGTGGAACTTATGGGCACTCCCGATCAAATTGCTACTGCTGAGAAATTGATTAACGAAGTTCTTGCTGAGGCTGAAGCTGGAGGTTCCGGTATTGTTGCTAGGCGACTGACTGGACAAGCTGGGTCTGAGCAATTTGTGATGAAAATTCCAAATAATAAAGTTGGACTTGTGATTGGAAAAGGAGGAGAAACAATAAAGAATATGCAAGCTCAGACTGGAGCAAGAATTCAGGTGATACCATTGCATCTTCCCCCAGGTGACACATCAACGGAACGAACATTACAAATTGATGGAACCAGTGAACAAATTGAGTCTGCAAAACAGTTGGTTAATCAAGTCATTAGTGAGAATCGTCTTAGAAATCCATCAATGTCTGGTGGTTATCCCCAACAAGGTTACCAAGCCCGACCACCTACTAGCTGGGTTCCTCCTGGTGCTCCTATGCAACAATCTGGTTATGGCTATGTGCAGCCTGGAGGATACTCTGGCCCATCACCCCAGTATAACATGTCTCAGCAACCATATCCCGGATATCCTCCCCAGTCATCTGGTGGATATTCCTCCAATTGGGACCAGTCCTCTGTACCACCTCAACAGTCAACTCATGGTGGTGGTTATGATTACTATGGTCAACAGCAACAGCAAAATTCTGGGGGTCCTCCAGCTGCAGCGGATGGTACTGCTTATAATTATGGTCAGCCACCTTCATCTGGTTATAACCATCCTGGCCAGGGTTATTCTCAGGACAGCTATGGTGGGTACAGCGCACCACCACAATCAGGGTATGGGCAGCCACCTACATATGATCAGCAGCAAGGCTATGGCTCAGCCTCCAACTATGGTGGTGGCAGCAACCCAACACAGGAGGGCCATGCTCCCAGCTATGGGTCTCAAGGAGGGGACACAACCCAGCCTCCTCCAGCTGTCCCAACTTCAATGCCCCAGCAAGGTTATGGTACTAACCAGCAGCCAAGCCCAAACCCTGCTACCTATCCAGCTCAAGGAACTGTGCAGCCAGGTTATGGGATGCCTCCAACTTCTCAAGCAGCTTATGGCAGCCAACCCCAAGCACAGTCTGGATATGGAGCTGCTTACGGGGCCCCTCCGCCTCAAAAGCCTAGCGGCACTCCTGCTTATGGGCAGTCAGCTCAATCACCCAGCACAGCAGGAGGATATGGTCAACCAGGGTATCCTCCTGCTCAGCCCCCTTCTGGCTATGCTCAATCGGAATCTGGTCCACAAAGAGCTCCACCCCCATATGGTTCTGCAGCGCAGCCAGGTTATGGTCCCCCACCATATGGTGCTCATCCTGGCGGTCAGCCTGGTTATGGTCAGGCACCTCCATCATACAACAGTGGTTCTTATGGTGCTGGTTACACTCAACCTCCAGCATATTCTGCTGATGGTACACCAGCACAGGCTGCCCAACAAGGTGGTGTCGCTAAAGCATCGCCTCAAAGTTGA 2211 0.502 MYFSFTWDRYDAEELDAESAGVSLDSSSKTSDVIVPKSKGADYRHLLAEAQSQENASLDGVLFGFLPLNLPRNLMADEAQYSSSADNTSHKRKYEEPPLSQSTHRPTGFSAPIASTSPDSSHAPPPSYNSVPPPAATGIELAKQRAQEVAARLLNSSGATGLDAKRSKFENGASGFDSNDAKPQYSVPSAAPISYAYQGSSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDSDPNSLTRTVELMGTPDQIATAEKLINEVLAEAEAGGSGIVARRLTGQAGSEQFVMKIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQIDGTSEQIESAKQLVNQVISENRLRNPSMSGGYPQQGYQARPPTSWVPPGAPMQQSGYGYVQPGGYSGPSPQYNMSQQPYPGYPPQSSGGYSSNWDQSSVPPQQSTHGGGYDYYGQQQQQNSGGPPAAADGTAYNYGQPPSSGYNHPGQGYSQDSYGGYSAPPQSGYGQPPTYDQQQGYGSASNYGGGSNPTQEGHAPSYGSQGGDTTQPPPAVPTSMPQQGYGTNQQPSPNPATYPAQGTVQPGYGMPPTSQAAYGSQPQAQSGYGAAYGAPPPQKPSGTPAYGQSAQSPSTAGGYGQPGYPPAQPPSGYAQSESGPQRAPPPYGSAAQPGYGPPPYGAHPGGQPGYGQAPPSYNSGSYGAGYTQPPAYSADGTPAQAAQQGGVAKASPQS 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0769 736 MobiDBLite consensus disorder prediction 625 640 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 367 736 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 411 470 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 100 124 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 80 135 - -
Lele03g0769 736 Pfam KH domain 295 360 IPR004088 GO:0003723
Lele03g0769 736 Pfam KH domain 203 268 IPR004088 GO:0003723
Lele03g0769 736 MobiDBLite consensus disorder prediction 479 555 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 367 386 - -
Lele03g0769 736 Gene3D K Homology domain, type 1 287 387 IPR036612 GO:0003723
Lele03g0769 736 Gene3D K Homology domain, type 1 195 286 IPR036612 GO:0003723
Lele03g0769 736 CDD KH-I 294 359 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 668 686 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 694 708 - -
Lele03g0769 736 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 189 551 - -
Lele03g0769 736 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 288 369 IPR036612 GO:0003723
Lele03g0769 736 ProSiteProfiles Type-1 KH domain profile. 199 266 - -
Lele03g0769 736 ProSiteProfiles Type-1 KH domain profile. 291 359 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 562 609 - -
Lele03g0769 736 SMART kh_6 290 364 IPR004087 GO:0003676
Lele03g0769 736 SMART kh_6 198 271 IPR004087 GO:0003676
Lele03g0769 736 CDD KH-I 201 266 - -
Lele03g0769 736 MobiDBLite consensus disorder prediction 715 736 - -
Lele03g0769 736 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 202 277 IPR036612 GO:0003723
Lele03g0769 736 FunFam KH domain-containing protein 286 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0769 Lele-ChrLele03 4483339 4491844 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0769 03 4483339 4491844 Lele03g0769 03 4483339 4491844 ECH
Lele01g0774 01 4481539 4489205 Lele03g0769 03 4483339 4491844 hybridization
Lele02g0751 02 4527746 4532965 Lele03g0769 03 4483339 4491844 hybridization