Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0751 ATGGCCGACGAAGCACAGTATTCATCGGGCACAGATACCACGTCTCACAAGCGCAAGTATGAAGAACCACTTCTCTCTCAATCAACTGACAGGCCCACTGGCTTCTCTGCGCCTCTAGCCTCTGCATCTCCCGACGGTTCTCACGCTCCGTCTCCCTCCTATAACAGCGTCCCGCCTCCGGCGGCAACTGGTATCGAGCTTGCCAAACAGCGTGCTCAGGAGGTTGCTGCTCGCCTCTTAAACAGCAGTGGAGCAACTGGGTTGGATGCCAAGCGTTCCAAGGTTGAGAACGGTGCTTCAGGATTCGATTCCCACGACGCGAAGCTCCAGTACTCATTACCATCAGCTGCTCCCATTTCTTATGCCTATCAGGGTACTAGCAAAAAGATAGACATTCCAAATGGAAGGGTCGGCGTTATTATTGGTAAAGGTGGGGAGACAATCAAGTATCTTCAAACGCAGTCTGGAGCGAAGATCCAAGTTACCCGTGACATGGATGCAGATCCAAATTCTCTAACAAGGATGGTGGAACTTATGGGCACTCCTGATCAAATTGCTACTGCCGAGAAATTGGTTAACGAAGTTCTTGCAGAGGCTGAAGCTGGAGGTTCTGGTATTGCTGGTAGGCGGCTGACTGGACAAGCTGGGTCTGAGCAATTTGTGATGAATATTCCAAATAATAAAGTTGGACTTGTGATTGGAAAAGGAGGAGAAACAATAAAGAATATGCAAGCTCAGACTGGAGCAAGAATTCAGGTGATACCATTGCATCTTCCCCCAGGTGACACATCGACTGAACGAACATTACAAATTGATGGAACCAGTGATCAAATTGAGTCTGCAAAACAGTTGGTTAATGGAGTCATTAGTGAGAATCGTCTTAGAAATCCATCAATGTCTGGTGGTTATCCACAACAAGGTTACCAAGCCCGACCACCTACTAGCTGGGTTCCTCCTGGTGCTCCTATGCAACAACCTGGTTATGGTTATGTGCAACCTGGAGCATACTCTGGCCCATCACACCAGTATAACATGCCTCAGCAACCATATTCTGGATATCCTCCTCAGTCATCTGGTGGATACTCCTCCAATTGGGACCAGTCCTCTGTACCACCTCAACAGTCAACTCATGATGGTGGTTATGATTACTATGGTCAACAGCAACAGCAAAATGCTGGGGGTCCTCCACCTGCAGCTGATGGGACTGCTTATAATTATGGTCAGCCACCTTCATCTGGTTATAACCATCCTGGCCAGGGTTATACTCAGGACAGCTATGGTGGGTACAGCGCACCACCACAATCAGGGTACGGGCAGCCTTCCCCAGCTGTCCCAACTTCAATGTCCCAGCAAGGTTATGGTTCTAACCAGCAGCCAAGCCCAAACCCAGTTACCTATCCAGCTCAAGGAGCTGCACAGCCTGGTTACGGGATGCCTCCAACTTCTCAAGCAGCTTATGGCAGTCAACCCCAAGCACAGTCTGGTTATGGGGCCCCTCCACCTCAAAAGCCTAGTGGCACTCCTGTTTATGGGCAGTCCGCACAATCTCCCAGCACAGCAGGAGGCTATGGTCAACCAGGATATCCTCCTGCTCAGCCCCCTTCTGGCTATGCTCAATCAGAATCTGGTCCACAAAGAGCTCCACCGCCATATGGTTGTGCAGCGCAACCAGGTTATGGTGCCCCACCATATGGTGCTCCTTCTGGTGGTCAGCCTGGTTATGGTCAGGCACCTCCATCGTACAACAGTGGTTCTTATGGTGCCGGTTACACTCAACCTCCAGCATATTCTGCTGATGGTACACCAGCACAGGCTACCCAACAAGGTGGTGTTGCTAAAGCATCGCCTCAAAGTTGA 1857 0.503 MADEAQYSSGTDTTSHKRKYEEPLLSQSTDRPTGFSAPLASASPDGSHAPSPSYNSVPPPAATGIELAKQRAQEVAARLLNSSGATGLDAKRSKVENGASGFDSHDAKLQYSLPSAAPISYAYQGTSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDADPNSLTRMVELMGTPDQIATAEKLVNEVLAEAEAGGSGIAGRRLTGQAGSEQFVMNIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSTERTLQIDGTSDQIESAKQLVNGVISENRLRNPSMSGGYPQQGYQARPPTSWVPPGAPMQQPGYGYVQPGAYSGPSHQYNMPQQPYSGYPPQSSGGYSSNWDQSSVPPQQSTHDGGYDYYGQQQQQNAGGPPPAADGTAYNYGQPPSSGYNHPGQGYTQDSYGGYSAPPQSGYGQPSPAVPTSMSQQGYGSNQQPSPNPVTYPAQGAAQPGYGMPPTSQAAYGSQPQAQSGYGAPPPQKPSGTPVYGQSAQSPSTAGGYGQPGYPPAQPPSGYAQSESGPQRAPPPYGCAAQPGYGAPPYGAPSGGQPGYGQAPPSYNSGSYGAGYTQPPAYSADGTPAQATQQGGVAKASPQS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0751 618 CDD KH-I 220 285 - -
Lele02g0751 618 MobiDBLite consensus disorder prediction 289 312 - -
Lele02g0751 618 SMART kh_6 216 290 IPR004087 GO:0003676
Lele02g0751 618 SMART kh_6 124 197 IPR004087 GO:0003676
Lele02g0751 618 MobiDBLite consensus disorder prediction 482 500 - -
Lele02g0751 618 FunFam KH domain-containing protein 212 312 - -
Lele02g0751 618 ProSiteProfiles Type-1 KH domain profile. 217 285 - -
Lele02g0751 618 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 213 296 IPR036612 GO:0003723
Lele02g0751 618 CDD KH-I 127 192 - -
Lele02g0751 618 Gene3D K Homology domain, type 1 209 312 IPR036612 GO:0003723
Lele02g0751 618 MobiDBLite consensus disorder prediction 405 467 - -
Lele02g0751 618 MobiDBLite consensus disorder prediction 1 61 - -
Lele02g0751 618 MobiDBLite consensus disorder prediction 575 590 - -
Lele02g0751 618 MobiDBLite consensus disorder prediction 597 618 - -
Lele02g0751 618 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 119 454 - -
Lele02g0751 618 MobiDBLite consensus disorder prediction 507 522 - -
Lele02g0751 618 Pfam KH domain 129 194 IPR004088 GO:0003723
Lele02g0751 618 Pfam KH domain 221 286 IPR004088 GO:0003723
Lele02g0751 618 Gene3D K Homology domain, type 1 125 205 IPR036612 GO:0003723
Lele02g0751 618 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 127 203 IPR036612 GO:0003723
Lele02g0751 618 MobiDBLite consensus disorder prediction 289 618 - -
Lele02g0751 618 MobiDBLite consensus disorder prediction 337 395 - -
Lele02g0751 618 ProSiteProfiles Type-1 KH domain profile. 125 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0751 Lele-ChrLele02 4527746 4532965 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele02g0751 02 4527746 4532965 Lele02g0751 02 4527746 4532965 ECH
Lele02g0751 02 4527746 4532965 Lele03g0769 03 4483339 4491844 hybridization
Lele02g0751 02 4527746 4532965 Lele04g0768 04 4671704 4680140 hybridization