Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0774 ATGAAATCCGAGGGCCGAATAAAACCAGACCATTCCCAAGGGCGGGTCAGGCATGTTCTGCAGCATTCGAGAAAATATGGAACCGAAATCGCAGAAATCGGGTTTCTTCCACTCAATCTTTCAAGAAACCTAATGGCCGACGAAGCACAATATTCATCGGGCACAGATACCACGTCCCACAAGCGCAAGTATGAAGAGCCACCACTCTCTCAATCAACTCACAGGCCTACCGGCTTCTCTGCGCCTATTGCGTCTACATCTCCCGATAGTTCTCACGCTGCGCCTCCCTCCTATAACAGCGTCCCGCCCCCGGCGGCAACTGGTATCGAGCTGGCCAAGCAACGAGCTCAGGAGGTTGCTGCTCGCCTCTTAAACAGCAGTGGAGCAACTGGGTTGGATGCCAAGCGTTCCAAGTTCGAGAACGGTGCTTCAGGATTTGATTCCAACGATGCGAAGCCCCAGTACTCAGTCCCATCAGCTGCTCCCATTTCTTATGCCTATCAGGGTACTAGCAAAAAGATAGACATTCCCAATGGAAGGGTTGGCGTTATTATTGGTAAAGGTGGGGAGACAATCAAGTATCTTCAAACGCAGTCTGGAGCGAAGATCCAAGTTACCCGTGATATGGATTCAGACCCAAATTCTCTAACAAGGACGGTGGAACTTATGGGCACTCCCGATCAAATTTCTACTGCTGAGAAATTGATTAACGAAGTTCTTGCTGAGGCTGAAGCTGGAGGTTCCGGGATTGTTGCTAGGCGACTGACTGGACAAGCTGGGTCTGAGCAATTTGTGATGAAAATTCCAAATAATAAAGTTGGACTTGTGATTGGAAAAGGAGGAGAAACAATAAAGAATATGCAAGCTCAGACTGGCGCAAGAATTCAGGTGATACCATTGCATCTTCCCCCAGGTGACACATCAATGGAACGAACATTACAAATTGATGGAACCAGTGAACAAATTGAGTCTGCAAAACAGTTGGTTAATCAAGTCATTAGTGAGAATCGTCTTAGAAATCCATCAATGTCTGGTGGTTATCCCCAACAAGGTTACCAAGCCCGACCACCTACTAGCTGGGTTCCTCCTGGTGCTCCTATGCAACAACCTGGTTATGGCTATGTGCAGCCTGGAGGATACTCTGGCCCATCACCCCAGTATAACATGCCTCAGCAACCATATCCCGGATATCCTCCCCAGTCATCTGGTGGATATTCCTCCAATTGGGACCAGTCCTCTGTACCACCTCAACAGTCAACTCATGGTGGTGGTTATGATTACTATGGTCAACAGCAACAGCAAAATTCTGGGGGTCCTCCACCTGCAGCGGATGGGACTGCTTATAATTATGGTCAGCCACCTTCATCTGGTTATAACCATCCTGGCCAGGGTTATTCTCAGGATAGCTATGGTGGGTACAGCGCACCACCACAATCAGGATATGGGCAGCCACCTACATATGATCAGCAGCAAGGCTATGGCTCAGCCTCCAACTATGGTGGTGGCAGCAACCCAACACAGGAGGGCCATGCTCCCAGCTATGGGTCTCAAGGAGGAGACGCAACCCAGCCTCCTCCAGCTGTCCCAACTTCAATGCCCCAGCAAGGTTATGGTACTAACCAGCAGCCAAGCCCGAACCCTGCTACCTATCCAGCTCAAGGAACTGTGCAGCCAGGTTATGGGATGCCTCCAACTTCTCAAGCAGCTTATGGCAGCCAACCCCAAGCACAGTCTGGATATGGAGCTGCTTATGGGCCCCCTCCACCTCAAAAGCCTAGCAGCACTCCTGCTTATGGGCAGTCAGCTCAATCACCCAGCACAGCAGGAGGATATGGTCAACCAGGGTATCCTTCTGCTCAGCCCCCTTCTGGATATGCTCAATCAGAATCTGGTCCACAAAGAGTTCCACCCCCATATGGTTCTGCAGCGCAACCAGGTTATGGTCCCCCACCATATGGTGCTCAGCCTGGCGGTCAGCCTGGTTATGGTCAGGCGCCTCCATCATATAACAGTGGTTCGTATGGTGCTGGTTACACTCAACCTCCAGCATATTCTGCTGATGGTGCACCAGCACAGGCTGCCCAACAAGGTGGTGTCGCTAAAGCATCGCCTCAAAGTTGA 2121 0.5068 MKSEGRIKPDHSQGRVRHVLQHSRKYGTEIAEIGFLPLNLSRNLMADEAQYSSGTDTTSHKRKYEEPPLSQSTHRPTGFSAPIASTSPDSSHAAPPSYNSVPPPAATGIELAKQRAQEVAARLLNSSGATGLDAKRSKFENGASGFDSNDAKPQYSVPSAAPISYAYQGTSKKIDIPNGRVGVIIGKGGETIKYLQTQSGAKIQVTRDMDSDPNSLTRTVELMGTPDQISTAEKLINEVLAEAEAGGSGIVARRLTGQAGSEQFVMKIPNNKVGLVIGKGGETIKNMQAQTGARIQVIPLHLPPGDTSMERTLQIDGTSEQIESAKQLVNQVISENRLRNPSMSGGYPQQGYQARPPTSWVPPGAPMQQPGYGYVQPGGYSGPSPQYNMPQQPYPGYPPQSSGGYSSNWDQSSVPPQQSTHGGGYDYYGQQQQQNSGGPPPAADGTAYNYGQPPSSGYNHPGQGYSQDSYGGYSAPPQSGYGQPPTYDQQQGYGSASNYGGGSNPTQEGHAPSYGSQGGDATQPPPAVPTSMPQQGYGTNQQPSPNPATYPAQGTVQPGYGMPPTSQAAYGSQPQAQSGYGAAYGPPPPQKPSSTPAYGQSAQSPSTAGGYGQPGYPSAQPPSGYAQSESGPQRVPPPYGSAAQPGYGPPPYGAQPGGQPGYGQAPPSYNSGSYGAGYTQPPAYSADGAPAQAAQQGGVAKASPQS 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0774 706 MobiDBLite consensus disorder prediction 638 656 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 664 678 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 449 524 - -
Lele01g0774 706 Gene3D K Homology domain, type 1 258 357 IPR036612 GO:0003723
Lele01g0774 706 Gene3D K Homology domain, type 1 165 257 IPR036612 GO:0003723
Lele01g0774 706 SMART kh_6 260 334 IPR004087 GO:0003676
Lele01g0774 706 SMART kh_6 168 241 IPR004087 GO:0003676
Lele01g0774 706 CDD KH-I 171 236 - -
Lele01g0774 706 ProSiteProfiles Type-1 KH domain profile. 169 236 - -
Lele01g0774 706 ProSiteProfiles Type-1 KH domain profile. 261 329 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 532 579 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 337 706 - -
Lele01g0774 706 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 264 336 IPR036612 GO:0003723
Lele01g0774 706 MobiDBLite consensus disorder prediction 70 96 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 398 440 - -
Lele01g0774 706 FunFam KH domain-containing protein 256 356 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 51 105 - -
Lele01g0774 706 Pfam KH domain 265 330 IPR004088 GO:0003723
Lele01g0774 706 Pfam KH domain 173 238 IPR004088 GO:0003723
Lele01g0774 706 MobiDBLite consensus disorder prediction 595 613 - -
Lele01g0774 706 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 163 521 - -
Lele01g0774 706 MobiDBLite consensus disorder prediction 337 356 - -
Lele01g0774 706 CDD KH-I 264 329 - -
Lele01g0774 706 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 167 246 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0774 Lele-ChrLele01 4481539 4489205 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0774 01 4481539 4489205 Lele01g0774 01 4481539 4489205 ECH
Lele01g0774 01 4481539 4489205 Lele03g0769 03 4483339 4491844 hybridization
Lele01g0774 01 4481539 4489205 Lele04g0768 04 4671704 4680140 hybridization