Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0575 ATGGCGCGCGCCATCGCATCGGGCCGTTTCTTTGTTGGTCCCTCTTCTGTTCCTAACCTCATTTTCTCTAGTACGAGAGTCAGGGCTACACAGACATTTATCTGGAATCGGGCGAGTATACTCAGCTCACGCTCGATGAATCAACCCACTTCTTTGTCTTCCACAGATCCCATCGCTTCCTCTGAAAACGACAAGTCGCAGGCAGAAATCGCCGATGTTATCGTGCAGTATGTGGTCCTCCGGCGAGACCTGATTGACACTTGGCCTCTTGGAAGTGTGGTTACACAAGGTTGCCATGCTTCTGTGTCGGCCATCTGGTCCAATAAAGATGACCCTCACACCGGCGATTACTGCAGCCCCGAGAAAATCGATTCTATGCACAAGGTCACACTTGAAGTGAAAGGAGGACCTCAGATTTTGAACTTGTCCGAGAAGCTCACATCCGGTGGCATTGTTCACAAGTTGTGGATTGAACAACCTGAAAACATACCAACATGCCTTGCGACAAAACCTTATCCAAAATCAATGATTTCAATTGGAGCAGCTGATTAG 552 0.4855 MARAIASGRFFVGPSSVPNLIFSSTRVRATQTFIWNRASILSSRSMNQPTSLSSTDPIASSENDKSQAEIADVIVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSNKDDPHTGDYCSPEKIDSMHKVTLEVKGGPQILNLSEKLTSGGIVHKLWIEQPENIPTCLATKPYPKSMISIGAAD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0575 183 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 42 178 IPR042237 -
Lele03g0575 183 Pfam Peptidyl-tRNA hydrolase PTH2 75 177 IPR002833 GO:0004045
Lele03g0575 183 SUPERFAMILY Peptidyl-tRNA hydrolase II 74 178 IPR023476 -
Lele03g0575 183 CDD PTH2_like 74 175 - -
Lele03g0575 183 Gene3D Bit1 74 179 IPR023476 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0575 Lele-ChrLele03 3402222 3403545 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0569 01 3366914 3368234 Lele03g0575 03 3402222 3403545 hybridization
Lele02g0564 02 3392351 3393489 Lele03g0575 03 3402222 3403545 hybridization