Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0548 ATGGGCTGTGCACAATCGAAAATAGACAATGAAGAATCGGTGGCTCGCTGTAAGGAGCGCAAGACCTTGATGAAAGATGCGGTGGTTGCTCGGAATGCCTTCGCCGCCGGCCATTCCGGGTACGCTATGTCTCTGAAGAACACTGGAGCTGCACTGAGCGACTACGGCCACGGCGAAAGCTACGTCACTCCAGAACTCCACCAGCCACCATTGGACCACGCTTCAGAGCCGCCGCCTCCCCCTCCACCGCTCATGGAAGACAGCCTCCCGCCACCTCCGCCCCCGCTCCCAAATTTCCCTCCAAGCCCGCTTAAGCGAGCTGCGACGATGCCGGCAATCACTATGCAACATCAAAAACCCTCCCGCGCGATGGATTCTGACGCCATTGCTGAAGAAGACGAGGACGAAGAAGAAAATATTAAAATGAGTAAAGGTAATGGAGGAAAGTCGTTAAAAAAGGGAGGATCTGAGGAAGCGTTGTCTTCCCCGCCTCGGACTCCAGATACGAAGCCAGTCCCGCCCATGCCTGAATCGAAGGGTATGGCTTGGGATTACTTTTTTATGGTGGATAACATGGCAGGACCATCTTTGGGTGGGGAAGATGAGATTGAAAATGGGAACGAGGAGAGTGAAGCAATGGGTTATCATGAAGCTGAGAATGTGGGTGGTGGTGCAAGCCATATCAACATGAATGAAGTTGAACCCAAGACGCCGGAGAAGGTAGAGGTAAATGTGCAGGAGGAAATAGTGGAGTCTGTGAGTGAGGCAAAGCATATTGAGCACTCGAAGACTGCTCCACCAGATTTCAGGAGAGCAATGAAGGTGGTTCCAAGTGTTAATCTGATGCAGATTCTTACTGAGCTTGACGATCACTTCTTGAAGGCCTCAGAGAGTGCACAAGAGGTCGCCAAGATGCTTGAGGCCACTAGATTGCATTACCATTCAAATTTCGCAGATAATCGCGGGCATATTGATCATTCTGCTAGAGTTATGCGCGTGATAACATGGAATAGATCGTTCAGAGGTGTGTCTAATGGCAATGGAGCAAAGGATGATTTTGATTCAGAAGATTATGAAACTCATGCCACTGTCTTGGACAAGCTGTTAGCCTGGGAAAAAAAGCTGTATGAAGAGGTGAAGCAAGCTGAGCTGATGAAGTTTGAATATCAGAGAAAAGTTACATTACTGAACAAACAGAATAAACGTAAAGCGAGTGCCGAAGCTTTGGAAAAAACCAAAGCAGCTGTGAGCCATCTTCATACAAGATATATTGTTGACATGCAGTCAATGGATTCAACGGTTTCAGAAGTGAATCATATTCGTGATGCACAGTTATATCCAAAACTCGTTGCTCTTGTGAATGGGATGGCCAATATGTGGGAAAATATGAGCATACATCATGACAGCCAGCTGAAAATAGTAATAGATCTCAAAGCTTTAGATATATCTCAAGCTCCTAAGGAAACAACCAAGCATCATTATGAGCGGACCGTCCAACTTGCTAATGTTGTCCAAGAATGGCACTTACAATTTGAGAAATTTGTGACTCACCAGAAACAGTACATCCAAGCTCTTAGTAGCTGGCTAAAGTTAAACCTCATTCCCATTGAAAGCAGCCTAAAGGAGAAAATCTCATCCCCACCGAAAGCCCAGAATCCACCTATTCAATCCCTTCTTCAAGCTTGGCATGATTATGTTGATAGGCTTCCAGATGAGCTCGCGAGAACGGCTATTCAATCCTTTGCTGCTGTGATAAAGACTATCATACTTCAACAGGAGGAAGAGATGAAGCTAAAGGAGAAATGTGAGGAAACCAGAAAGGAATACTTGAGGAAAAACCAAGCATTTGAGGAATGGTACCAGAAGTATTTGCTGAGGAGGGGTCATGATGAAACAGATCATGAAAGAGGAGATGAAGTAACTGCAAACAATCCTGTATCAGAGAAGCAGTTTGCTGTCGAGAGCTTGAAGAAGAGATTAGAAGAGGAAATCGAATCTCACCAAAAACACTGCGTTCAGGTTCGAGAGAAGTCACTACAGAGTCTCAAGACTCGTTTGCCTGAACTTTTCCGAGCAATGTCAGACTATTCTTATGCCTGCGCCGACGCTTATGAGAAACTGAAGTCTATTGCACATTCACATGGGGCTGCTCCGAGACCTTGA 2163 0.4609 MGCAQSKIDNEESVARCKERKTLMKDAVVARNAFAAGHSGYAMSLKNTGAALSDYGHGESYVTPELHQPPLDHASEPPPPPPPLMEDSLPPPPPPLPNFPPSPLKRAATMPAITMQHQKPSRAMDSDAIAEEDEDEEENIKMSKGNGGKSLKKGGSEEALSSPPRTPDTKPVPPMPESKGMAWDYFFMVDNMAGPSLGGEDEIENGNEESEAMGYHEAENVGGGASHINMNEVEPKTPEKVEVNVQEEIVESVSEAKHIEHSKTAPPDFRRAMKVVPSVNLMQILTELDDHFLKASESAQEVAKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGNGAKDDFDSEDYETHATVLDKLLAWEKKLYEEVKQAELMKFEYQRKVTLLNKQNKRKASAEALEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVNGMANMWENMSIHHDSQLKIVIDLKALDISQAPKETTKHHYERTVQLANVVQEWHLQFEKFVTHQKQYIQALSSWLKLNLIPIESSLKEKISSPPKAQNPPIQSLLQAWHDYVDRLPDELARTAIQSFAAVIKTIILQQEEEMKLKEKCEETRKEYLRKNQAFEEWYQKYLLRRGHDETDHERGDEVTANNPVSEKQFAVESLKKRLEEEIESHQKHCVQVREKSLQSLKTRLPELFRAMSDYSYACADAYEKLKSIAHSHGAAPRP 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0548 720 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Lele03g0548 720 PANTHER UNCHARACTERIZED 1 712 - -
Lele03g0548 720 Pfam Protein of unknown function (DUF632) 281 586 IPR006867 -
Lele03g0548 720 Coils Coil 657 677 - -
Lele03g0548 720 MobiDBLite consensus disorder prediction 52 178 - -
Lele03g0548 720 MobiDBLite consensus disorder prediction 71 104 - -
Lele03g0548 720 Coils Coil 588 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0548 Lele-ChrLele03 3261497 3264675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0548 1 95 Acyl Lipid Metabolism Gene Families AT2G27090 35.714 1.08e-08 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0548 03 3261497 3264675 Lele03g0548 03 3261497 3264675 ECH
Lele01g0539 01 3230526 3233697 Lele03g0548 03 3261497 3264675 hybridization
Lele02g0534 02 3234031 3237217 Lele03g0548 03 3261497 3264675 hybridization